Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MIR5695-201ENST00000579717 85 ntBASIC2.91□□□□□ -1.94
PF4V1P10720 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.91□□□□□ -1.94
PF4V1P10720 AC007485.1-201ENST00000616755 206 ntBASIC2.91□□□□□ -1.94
PF4V1P10720 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PF4V1P10720 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PF4V1P10720 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PF4V1P10720 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PF4V1P10720 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PF4V1P10720 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.91□□□□□ -1.94
PF4V1P10720 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PF4V1P10720 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PF4V1P10720 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PF4V1P10720 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
PF4V1P10720 RNU1-62P-201ENST00000362599 164 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 Y_RNA.148-201ENST00000363557 117 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 SNORA22B-201ENST00000383876 138 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RNU6-1072P-201ENST00000384703 107 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RNU6-443P-201ENST00000384780 107 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AC093578.1-201ENST00000415219 368 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AC004386.2-201ENST00000441858 148 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.9□□□□□ -1.95
PF4V1P10720 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.9□□□□□ -1.95
PF4V1P10720 MTCO3P8-201ENST00000453691 755 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AC107032.1-201ENST00000485945 480 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RPS23P5-201ENST00000495419 428 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 SNORA40.14-201ENST00000516543 86 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RNU5F-4P-201ENST00000516581 114 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RNU2-44P-201ENST00000516795 194 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 RN7SKP209-201ENST00000516888 304 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AC022868.1-201ENST00000517767 391 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 DEFB131C-201ENST00000528817 165 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 AC008011.1-201ENST00000545989 227 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 MIR5006-201ENST00000583027 110 ntBASIC2.9□□□□□ -1.95
PF4V1P10720 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.9□□□□□ -1.95
PF4V1P10720 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PF4V1P10720 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
PF4V1P10720 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
PF4V1P10720 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.9□□□□□ -1.95
PF4V1P10720 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 Y_RNA.80-201ENST00000362996 102 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 SNORA38-201ENST00000363946 132 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNY3P11-201ENST00000364153 102 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 SNORA25B-201ENST00000365507 128 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 SNORA18.3-201ENST00000384122 132 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNU6-281P-201ENST00000384212 103 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNU6-611P-201ENST00000384276 104 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 MIR483-201ENST00000385070 76 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 MIR549A-201ENST00000385268 96 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PF4V1P10720 SNORD105B-201ENST00000458770 79 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 AC018868.1-201ENST00000491307 315 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.89□□□□□ -1.95
PF4V1P10720 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.89□□□□□ -1.95
PF4V1P10720 AC074250.1-201ENST00000511117 192 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNU6-344P-201ENST00000516635 111 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 RNU6-965P-201ENST00000516721 96 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 SNORA70.24-201ENST00000517233 118 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 AC093023.1-201ENST00000547375 507 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 AC006600.1-201ENST00000572529 153 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PF4V1P10720 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.89□□□□□ -1.95
PF4V1P10720 AP000553.6-201ENST00000641242 118 ntBASIC2.89□□□□□ -1.95
PF4V1P10720 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
PF4V1P10720 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PF4V1P10720 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
PF4V1P10720 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
PF4V1P10720 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PF4V1P10720 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.88□□□□□ -1.95
PF4V1P10720 RNA5SP50-201ENST00000363731 107 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PF4V1P10720 ATP5A1P2-201ENST00000412323 255 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AL160004.2-201ENST00000432935 350 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.88□□□□□ -1.95
PF4V1P10720 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 CHEK2P4-201ENST00000450340 246 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.88□□□□□ -1.95
PF4V1P10720 U8.22-201ENST00000459141 133 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AC106707.2-201ENST00000484182 374 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.88□□□□□ -1.95
PF4V1P10720 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.88□□□□□ -1.95
PF4V1P10720 MIR449C-201ENST00000516047 92 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 RNU6-1098P-201ENST00000516772 96 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.88□□□□□ -1.95
PF4V1P10720 AL442163.3-201ENST00000554110 156 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.88□□□□□ -1.95
PF4V1P10720 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.88□□□□□ -1.95
PF4V1P10720 AC007179.3-201ENST00000604976 235 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AC010999.1-201ENST00000611856 324 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 AL132822.1-201ENST00000617063 513 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PF4V1P10720 AC005592.1-201ENST00000566527 1640 ntBASIC2.88□□□□□ -1.95
PF4V1P10720 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PF4V1P10720 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms