Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SNORD116-28-201ENST00000516123 91 ntBASIC1.19□□□□□ -2.22
TPM2P07951 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TPM2P07951 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.19□□□□□ -2.22
TPM2P07951 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.19□□□□□ -2.22
TPM2P07951 AC023050.3-201ENST00000541142 333 ntBASIC1.19□□□□□ -2.22
TPM2P07951 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.19□□□□□ -2.22
TPM2P07951 SNORA59B-202ENST00000578183 701 ntBASIC1.19□□□□□ -2.22
TPM2P07951 VN1R107P-201ENST00000601784 209 ntBASIC1.19□□□□□ -2.22
TPM2P07951 BX284668.6-201ENST00000606899 438 ntBASIC1.19□□□□□ -2.22
TPM2P07951 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
TPM2P07951 AC136475.10-201ENST00000620253 385 ntBASIC1.19□□□□□ -2.22
TPM2P07951 SNORD115-7-201ENST00000365306 82 ntBASIC1.18□□□□□ -2.22
TPM2P07951 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
TPM2P07951 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM2P07951 AL365184.2-201ENST00000431139 435 ntBASIC1.18□□□□□ -2.22
TPM2P07951 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.18□□□□□ -2.22
TPM2P07951 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM2P07951 AC073910.1-201ENST00000445047 438 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC007547.1-201ENST00000462177 490 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.18□□□□□ -2.22
TPM2P07951 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
TPM2P07951 UBL5P1-201ENST00000507979 193 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC112206.4-201ENST00000515142 405 ntBASIC1.18□□□□□ -2.22
TPM2P07951 RNA5SP503-201ENST00000517047 117 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC022616.3-201ENST00000523940 148 ntBASIC1.18□□□□□ -2.22
TPM2P07951 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.18□□□□□ -2.22
TPM2P07951 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.18□□□□□ -2.22
TPM2P07951 MIR3664-201ENST00000579074 99 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC078795.3-201ENST00000602913 472 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AL121992.2-201ENST00000606262 256 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC138749.5-201ENST00000611461 208 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC040896.1-201ENST00000613819 479 ntBASIC1.18□□□□□ -2.22
TPM2P07951 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC116165.2-201ENST00000616705 206 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC009878.1-201ENST00000621819 340 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC138649.3-201ENST00000622154 254 ntBASIC1.18□□□□□ -2.22
TPM2P07951 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
TPM2P07951 SNORD32A-201ENST00000364805 84 ntBASIC1.17□□□□□ -2.22
TPM2P07951 RNU6-378P-201ENST00000384324 107 ntBASIC1.17□□□□□ -2.22
TPM2P07951 SNORA26.3-201ENST00000391119 136 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AL117342.1-201ENST00000404861 406 ntBASIC1.17□□□□□ -2.22
TPM2P07951 RNU2-8P-201ENST00000410727 190 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.17□□□□□ -2.22
TPM2P07951 snoU13.23-201ENST00000458863 104 ntBASIC1.17□□□□□ -2.22
TPM2P07951 RPS23P5-201ENST00000495419 428 ntBASIC1.17□□□□□ -2.22
TPM2P07951 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.17□□□□□ -2.22
TPM2P07951 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.17□□□□□ -2.22
TPM2P07951 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.17□□□□□ -2.22
TPM2P07951 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
TPM2P07951 NIFKP6-201ENST00000598115 845 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AC008147.4-201ENST00000617570 1204 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AL353997.5-201ENST00000618886 171 ntBASIC1.17□□□□□ -2.22
TPM2P07951 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
TPM2P07951 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TPM2P07951 RNU1-76P-201ENST00000362903 159 ntBASIC1.16□□□□□ -2.22
TPM2P07951 RNU6-428P-201ENST00000362942 107 ntBASIC1.16□□□□□ -2.22
TPM2P07951 RPS6P15-201ENST00000431996 751 ntBASIC1.16□□□□□ -2.22
TPM2P07951 AL133396.1-201ENST00000432048 687 ntBASIC1.16□□□□□ -2.22
TPM2P07951 RPL39P28-201ENST00000465655 155 ntBASIC1.16□□□□□ -2.22
TPM2P07951 AC016632.1-201ENST00000503994 196 ntBASIC1.16□□□□□ -2.22
TPM2P07951 Y_RNA.672-201ENST00000516289 104 ntBASIC1.16□□□□□ -2.22
TPM2P07951 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.16□□□□□ -2.22
TPM2P07951 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.16□□□□□ -2.22
TPM2P07951 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.16□□□□□ -2.22
TPM2P07951 AC008945.2-201ENST00000606056 604 ntBASIC1.16□□□□□ -2.22
TPM2P07951 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TPM2P07951 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
TPM2P07951 RNU6-877P-201ENST00000383868 107 ntBASIC1.15□□□□□ -2.23
TPM2P07951 SNORA20.2-201ENST00000383922 131 ntBASIC1.15□□□□□ -2.23
TPM2P07951 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TPM2P07951 SNORA11.2-201ENST00000408318 127 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.15□□□□□ -2.23
TPM2P07951 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.15□□□□□ -2.23
TPM2P07951 MTND1P18-201ENST00000448191 573 ntBASIC1.15□□□□□ -2.23
TPM2P07951 HSPE1P13-201ENST00000451143 297 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC013470.1-201ENST00000453438 462 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AL163973.1-201ENST00000484753 577 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.15□□□□□ -2.23
TPM2P07951 RNU6-567P-201ENST00000516746 107 ntBASIC1.15□□□□□ -2.23
TPM2P07951 RNU6-856P-201ENST00000516959 98 ntBASIC1.15□□□□□ -2.23
TPM2P07951 CYCSP23-201ENST00000519781 313 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.15□□□□□ -2.23
TPM2P07951 CYP4A27P-201ENST00000567218 190 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.15□□□□□ -2.23
TPM2P07951 Z99289.3-201ENST00000605586 594 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AL022345.2-201ENST00000606307 135 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.15□□□□□ -2.23
TPM2P07951 AC126177.8-201ENST00000618339 1015 ntBASIC1.15□□□□□ -2.23
TPM2P07951 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AP002371.2-201ENST00000624450 503 ntBASIC1.15□□□□□ -2.23
TPM2P07951 AC006927.3-201ENST00000638789 384 ntBASIC1.15□□□□□ -2.23
TPM2P07951 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TPM2P07951 RNU6-552P-201ENST00000362869 119 ntBASIC1.14□□□□□ -2.23
TPM2P07951 MIR764-201ENST00000390811 85 ntBASIC1.14□□□□□ -2.23
TPM2P07951 RPS29P13-201ENST00000402041 169 ntBASIC1.14□□□□□ -2.23
TPM2P07951 USP9YP14-201ENST00000430663 563 ntBASIC1.14□□□□□ -2.23
TPM2P07951 AC002486.1-201ENST00000435098 391 ntBASIC1.14□□□□□ -2.23
TPM2P07951 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.14□□□□□ -2.23
TPM2P07951 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms