Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU2-29P-201ENST00000410423 189 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 RN7SKP61-201ENST00000410642 295 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 MTCO3P46-201ENST00000425787 232 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 AC078809.1-201ENST00000427601 140 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 HMGB1P18-201ENST00000438801 619 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.24□□□□□ -2.21
MT-ND4P03905 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.24□□□□□ -2.21
MT-ND4P03905 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND4P03905 SNORA31.17-201ENST00000516953 127 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND4P03905 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.24□□□□□ -2.21
MT-ND4P03905 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.24□□□□□ -2.21
MT-ND4P03905 RMST_6.1-201ENST00000611980 203 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 AL450472.1-202ENST00000637286 180 ntBASIC1.24□□□□□ -2.21
MT-ND4P03905 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
MT-ND4P03905 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.23□□□□□ -2.21
MT-ND4P03905 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
MT-ND4P03905 RNU6-552P-201ENST00000362869 119 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 Y_RNA.159-201ENST00000363674 87 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 RNA5SP190-201ENST00000365222 118 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 SNORA26.3-201ENST00000391119 136 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 RN7SKP142-201ENST00000411236 328 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AC123900.1-201ENST00000420390 96 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 RPL23AP95-201ENST00000426806 265 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AL133396.1-201ENST00000432048 687 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 CETN4P-201ENST00000432407 469 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 MTND4P32-201ENST00000437189 1237 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 SNRPEP8-201ENST00000442866 260 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 MTND1P27-201ENST00000451117 902 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 RPS27AP8-201ENST00000452665 445 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.23□□□□□ -2.21
MT-ND4P03905 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.23□□□□□ -2.21
MT-ND4P03905 AC005741.1-201ENST00000511094 432 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 RNU6-430P-201ENST00000517078 107 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.23□□□□□ -2.21
MT-ND4P03905 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
MT-ND4P03905 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.23□□□□□ -2.21
MT-ND4P03905 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.23□□□□□ -2.21
MT-ND4P03905 SUB1P4-201ENST00000566062 339 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 SNORD53B-201ENST00000577887 78 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 MIR3923-201ENST00000579521 83 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.23□□□□□ -2.21
MT-ND4P03905 MTATP6P3-201ENST00000581686 676 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AP001596.2-201ENST00000608410 312 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 PCGEM1.1-201ENST00000613431 131 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 AC072046.2-201ENST00000618366 268 ntBASIC1.23□□□□□ -2.21
MT-ND4P03905 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.23□□□□□ -2.21
MT-ND4P03905 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
MT-ND4P03905 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
MT-ND4P03905 RNU6-1120P-201ENST00000362988 108 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 Y_RNA.399-201ENST00000383955 105 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 RNU6-378P-201ENST00000384324 107 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 SNORA12.2-201ENST00000391040 156 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 RNU2-41P-201ENST00000410991 178 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 MTCO3P41-201ENST00000414801 328 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 MTATP6P18-201ENST00000417994 673 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 NCOR1P3-201ENST00000420479 303 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 OOSP1P1-201ENST00000423265 274 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AL513185.2-201ENST00000425543 193 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND4P03905 SNRPFP3-201ENST00000457792 225 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 RNU1-131P-201ENST00000458943 161 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 RNU7-167P-201ENST00000459160 62 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 snoU13.26-201ENST00000459452 105 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AC105417.1-201ENST00000514691 285 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AL137161.1-201ENST00000532231 390 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.22□□□□□ -2.21
MT-ND4P03905 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 SUB1P3-201ENST00000564581 315 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
MT-ND4P03905 AC005786.1-201ENST00000588553 154 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC025811.1-201ENST00000604312 472 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AL356157.2-201ENST00000605122 111 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC116312.1-201ENST00000606841 314 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 AC008536.2-201ENST00000607284 349 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
MT-ND4P03905 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
MT-ND4P03905 AC092268.1-201ENST00000342691 405 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 RNU4-56P-201ENST00000364700 142 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 RNU6-60P-201ENST00000364792 103 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 SNORA36A-201ENST00000384221 132 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 RNU6-348P-201ENST00000384386 107 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 Y_RNA.504-201ENST00000384481 104 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.21□□□□□ -2.22
MT-ND4P03905 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.21□□□□□ -2.22
MT-ND4P03905 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.21□□□□□ -2.22
MT-ND4P03905 MTCYBP8-201ENST00000422855 651 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AC139712.2-201ENST00000424302 339 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AL354695.1-201ENST00000427935 228 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms