Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC083806.3-201ENST00000614016 455 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 AC091925.1-201ENST00000623204 462 ntBASIC3.79□□□□□ -1.8
RAPGEF3O95398 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAPGEF3O95398 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
RAPGEF3O95398 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.79□□□□□ -1.8
RAPGEF3O95398 RNY1P16-201ENST00000363063 111 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 RNU6-1027P-201ENST00000383998 107 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 RNU6-843P-201ENST00000384454 104 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 Y_RNA.577-201ENST00000384794 101 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC096649.2-201ENST00000416186 393 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAPGEF3O95398 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC012308.1-201ENST00000451232 178 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 FO393415.2-201ENST00000480085 343 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 RNU5F-8P-201ENST00000515941 111 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 ACA59.2-201ENST00000517061 156 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.78□□□□□ -1.8
RAPGEF3O95398 CBX3P8-201ENST00000532412 525 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC019159.1-201ENST00000605094 187 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC005014.2-201ENST00000607795 599 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 AC040896.1-201ENST00000613819 479 ntBASIC3.78□□□□□ -1.8
RAPGEF3O95398 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.78□□□□□ -1.8
RAPGEF3O95398 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RAPGEF3O95398 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAPGEF3O95398 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RAPGEF3O95398 RNU6-1160P-201ENST00000384546 104 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 MIR606-201ENST00000384851 96 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 RNU6-308P-201ENST00000390957 107 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 MCFD2P1-201ENST00000417812 300 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 AC008267.5-201ENST00000424928 265 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.77□□□□□ -1.81
RAPGEF3O95398 RPS29P6-201ENST00000438196 145 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 AC243964.1-201ENST00000441814 261 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 SNORA25.10-201ENST00000515926 124 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 Y_RNA.661-201ENST00000516003 99 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 RNU6-1045P-201ENST00000516321 107 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 AC093331.1-201ENST00000521474 169 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 DNAJC8P1-201ENST00000554535 372 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 MIR3605-201ENST00000583214 100 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 AC009318.2-201ENST00000610917 651 ntBASIC3.77□□□□□ -1.81
RAPGEF3O95398 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RAPGEF3O95398 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAPGEF3O95398 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAPGEF3O95398 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 SNORD56.1-201ENST00000362913 68 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 SNORD50.1-201ENST00000362987 71 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 RNU6-595P-201ENST00000363944 107 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 RNU6-1032P-201ENST00000384100 107 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 RNU6-738P-201ENST00000384531 106 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 Y_RNA.533-201ENST00000384596 114 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 RNA5SP390-201ENST00000410191 113 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 AC007969.2-201ENST00000441891 191 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 RN7SL442P-201ENST00000473804 320 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 RPL23AP70-201ENST00000483361 460 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 RNU6-327P-201ENST00000516270 127 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 SNORA31.23-201ENST00000517219 133 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 CKS1BP7-201ENST00000522230 235 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.76□□□□□ -1.81
RAPGEF3O95398 AL360085.1-201ENST00000604713 532 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 HMGB1P24-202ENST00000615653 685 ntBASIC3.76□□□□□ -1.81
RAPGEF3O95398 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RAPGEF3O95398 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RAPGEF3O95398 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RAPGEF3O95398 RNA5SP383-201ENST00000362934 120 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 RNU6-748P-201ENST00000384648 107 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 RNU6-19P-201ENST00000384718 107 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
RAPGEF3O95398 EIF1AXP1-201ENST00000419267 435 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 MTND2P23-201ENST00000422990 651 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AL365496.1-201ENST00000426885 215 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC079354.2-201ENST00000453523 154 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC025281.1-201ENST00000567026 265 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC091152.3-201ENST00000604227 325 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC103810.6-201ENST00000606708 136 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AC097372.5-201ENST00000623665 376 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 AL021368.2-201ENST00000606125 5352 ntBASIC3.75□□□□□ -1.81
RAPGEF3O95398 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RAPGEF3O95398 Y_RNA.48-201ENST00000362710 103 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RNU6-1159P-201ENST00000362933 107 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 Y_RNA.123-201ENST00000363338 102 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RNU1-105P-201ENST00000363470 161 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 Y_RNA.148-201ENST00000363557 117 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RNU6-799P-201ENST00000363567 107 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RNU6-750P-201ENST00000390946 107 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAPGEF3O95398 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RAPGEF3O95398 PTGES3P4-201ENST00000426243 356 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.74□□□□□ -1.81
RAPGEF3O95398 AL353997.1-201ENST00000432936 108 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms