Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA12O60330 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA12O60330 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDHGA12O60330 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 MIR29B2-201ENST00000385055 81 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC105758.1-201ENST00000506038 399 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 Y_RNA.721-201ENST00000517207 102 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC010928.2-201ENST00000588017 287 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 VN1R91P-201ENST00000594377 169 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
PCDHGA12O60330 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA12O60330 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA12O60330 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGA12O60330 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGA12O60330 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA12O60330 Y_RNA.40-201ENST00000362645 93 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 Y_RNA.158-201ENST00000363651 101 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 SNORD115-8-201ENST00000363856 82 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 SNORD115-38-201ENST00000365037 82 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 RNU6-308P-201ENST00000390957 107 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC114482.1-201ENST00000418010 247 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 MRPS18CP6-201ENST00000423587 223 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 ANXA2P1-201ENST00000505539 926 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 SNORA40.14-201ENST00000516543 86 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 SNORA31.16-201ENST00000516773 139 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA12O60330 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 ANP32BP3-201ENST00000559213 706 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC022432.1-201ENST00000595739 310 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 RPL30P11-203ENST00000598995 310 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL033523.1-201ENST00000605153 153 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL355802.3-201ENST00000607571 545 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC069294.1-201ENST00000608397 350 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
PCDHGA12O60330 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA12O60330 AC005592.1-201ENST00000566527 1640 ntBASIC3.15□□□□□ -1.9
PCDHGA12O60330 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHGA12O60330 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA12O60330 AC069528.2-201ENST00000624849 1991 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 Y_RNA.162-201ENST00000363683 102 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 RNU4-42P-201ENST00000364738 142 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 Y_RNA.496-201ENST00000384444 101 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 MIR628-201ENST00000385229 95 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PCDHGA12O60330 MRPL42P3-201ENST00000401492 326 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 AL356968.1-201ENST00000416622 474 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 MTCO3P29-201ENST00000432119 779 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHGA12O60330 Z82188.1-201ENST00000436709 154 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 GSTA11P-201ENST00000452866 669 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 AC090617.3-201ENST00000573670 475 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 AL078605.1-201ENST00000603529 500 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 RPL17P51-201ENST00000605218 238 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 PART1_1.1-201ENST00000611761 217 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
PCDHGA12O60330 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHGA12O60330 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA12O60330 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHGA12O60330 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA12O60330 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHGA12O60330 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHGA12O60330 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PCDHGA12O60330 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 Y_RNA.148-201ENST00000363557 117 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 Y_RNA.319-201ENST00000365138 92 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms