Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HMGN2P16-201ENST00000456802 261 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 AC099522.1-202ENST00000514718 367 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA2O43364 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA2O43364 AC120024.3-201ENST00000603167 156 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA2O43364 MIR4679-1-201ENST00000637619 75 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA2O43364 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA2O43364 AC026241.1-201ENST00000517873 2142 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 AC092435.4-201ENST00000623012 4159 ntBASIC4.67□□□□□ -1.66
HOXA2O43364 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA2O43364 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA2O43364 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA2O43364 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HOXA2O43364 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXA2O43364 RNU6-1210P-201ENST00000363775 107 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 RNU6-1082P-201ENST00000364574 107 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 SNORA48.7-201ENST00000391302 135 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 AC009237.10-201ENST00000414112 510 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 AC245291.1-201ENST00000419501 328 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 RPL21P129-201ENST00000491732 478 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 RNA5SP519-201ENST00000516480 119 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA2O43364 MIR378D2-201ENST00000580636 98 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 MIR4286-201ENST00000580651 93 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 AL031274.2-201ENST00000599419 203 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 AC012531.5-201ENST00000611375 151 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 MIR8069-1-201ENST00000616627 86 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 MIR8069-2-201ENST00000621412 86 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 AC007546.2-201ENST00000623996 360 ntBASIC4.66□□□□□ -1.66
HOXA2O43364 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA2O43364 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
HOXA2O43364 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.65□□□□□ -1.66
HOXA2O43364 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXA2O43364 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HOXA2O43364 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HOXA2O43364 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA2O43364 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA2O43364 RNU6-655P-201ENST00000362858 107 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 Y_RNA.294-201ENST00000364916 102 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 MIR134-201ENST00000385258 73 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 AL356095.1-201ENST00000417217 199 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 AL445584.1-201ENST00000431451 330 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA2O43364 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA2O43364 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA2O43364 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA2O43364 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA2O43364 snoU13.28-201ENST00000459235 104 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 RPL35AP15-201ENST00000468042 339 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA2O43364 Y_RNA.692-201ENST00000516627 105 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 HSPE1P18-201ENST00000517602 280 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA2O43364 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA2O43364 AC006254.2-201ENST00000603259 279 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 AL137843.1-201ENST00000605078 385 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 AC069528.2-201ENST00000624849 1991 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA2O43364 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA2O43364 MTND5P32-201ENST00000560711 1802 ntBASIC4.65□□□□□ -1.67
HOXA2O43364 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXA2O43364 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXA2O43364 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXA2O43364 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HOXA2O43364 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 RNU6-1305P-201ENST00000364353 104 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 RNA5SP513-201ENST00000364648 118 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 RNU6-147P-201ENST00000383983 107 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HOXA2O43364 RPL23AP62-201ENST00000463396 453 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 RNA5SP446-201ENST00000515955 82 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 MIR3121-201ENST00000579680 77 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 RN7SL600P-201ENST00000581811 299 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 RPL17P51-201ENST00000605218 238 ntBASIC4.64□□□□□ -1.67
HOXA2O43364 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HOXA2O43364 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HOXA2O43364 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXA2O43364 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXA2O43364 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HOXA2O43364 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXA2O43364 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXA2O43364 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HOXA2O43364 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HOXA2O43364 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA2O43364 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXA2O43364 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HOXA2O43364 MIR586-201ENST00000385035 97 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 MIR873-201ENST00000401120 77 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AL512604.1-201ENST00000404812 257 ntBASIC4.63□□□□□ -1.67
HOXA2O43364 AC023141.4-201ENST00000412031 328 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms