Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC068944.2-201ENST00000610373 403 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
SMKR1H3BMG3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.24□□□□□ -2.21
SMKR1H3BMG3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 MIR520A-201ENST00000384862 85 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RNU6-360P-201ENST00000390944 104 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RN7SKP142-201ENST00000411236 328 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 MTCO1P21-201ENST00000416634 589 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 EBAG9P1-201ENST00000418955 543 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 MTCYBP8-201ENST00000422855 651 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 VN1R108P-201ENST00000431580 830 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC099677.2-201ENST00000436385 175 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RNU7-63P-201ENST00000459054 62 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RNU7-180P-201ENST00000459240 63 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RPL9P9-202ENST00000466501 579 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 RPL26P26-201ENST00000480251 434 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC096745.1-201ENST00000509945 370 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AP003034.1-201ENST00000534621 422 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC090115.3-201ENST00000553218 849 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC009063.1-201ENST00000563342 702 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 HMGB1P33-201ENST00000563485 527 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 VN1R80P-201ENST00000597126 338 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC069114.2-201ENST00000604699 304 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 AC013412.1-201ENST00000610687 192 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.23□□□□□ -2.21
SMKR1H3BMG3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SMKR1H3BMG3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 RNU6-271P-201ENST00000363858 105 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 RNU6-996P-201ENST00000365438 107 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 MIR9-3-201ENST00000385084 90 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AC092017.2-201ENST00000427600 362 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 FTH1P12-201ENST00000432137 551 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AC096638.1-201ENST00000444678 216 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 HSPE1P24-201ENST00000450782 238 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 RNU7-138P-201ENST00000459479 64 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AC010531.2-201ENST00000465012 153 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 RPL36AP21-201ENST00000490372 323 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.22□□□□□ -2.21
SMKR1H3BMG3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMKR1H3BMG3 AC010615.1-201ENST00000594254 1764 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 RNU6-862P-201ENST00000362804 105 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 JTBP1-201ENST00000441314 247 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC245517.4-201ENST00000448601 281 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC079140.3-201ENST00000511111 550 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC108043.1-201ENST00000512696 574 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 MTND4P7-201ENST00000523876 130 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 MIR1273D-201ENST00000577266 86 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 MIR4528-201ENST00000577763 90 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC087752.4-201ENST00000605911 462 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AL392048.1-201ENST00000613946 534 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 uc_338.34-201ENST00000617467 174 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMKR1H3BMG3 AC009541.1-201ENST00000438279 2662 ntBASIC1.21□□□□□ -2.22
SMKR1H3BMG3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 RNU6-348P-201ENST00000384386 107 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 RNU2-7P-201ENST00000410794 178 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AL356320.1-201ENST00000429616 163 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AC245047.4-201ENST00000433189 144 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 USP9YP28-201ENST00000435142 589 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AC073415.1-201ENST00000449240 153 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 RNU6-1037P-201ENST00000459571 107 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 AL163973.1-201ENST00000484753 577 ntBASIC1.2□□□□□ -2.22
SMKR1H3BMG3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms