Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TRAV20A0A0B4J274 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AP003122.5-201ENST00000527668 3766 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 Y_RNA.60-201ENST00000362831 98 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 Y_RNA.498-201ENST00000384460 102 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 Y_RNA.570-201ENST00000384750 101 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 MTND1P19-201ENST00000511780 315 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 DEFB131C-201ENST00000528817 165 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 AC058791.1-201ENST00000608412 3198 ntBASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRAV20A0A0B4J274 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 SNORA20.1-201ENST00000364790 130 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RNU6-1175P-201ENST00000365200 107 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RNU6-290P-201ENST00000365212 101 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AC004866.1-201ENST00000411748 78 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AL390729.2-201ENST00000416137 156 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RPL30P4-201ENST00000429309 333 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 MICF-203ENST00000432679 129 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 MTND4LP30-201ENST00000454092 297 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 HSPE1P25-201ENST00000455484 251 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RPS23P5-201ENST00000495419 428 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RNU6-1023P-201ENST00000516137 106 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 Y_RNA.673-201ENST00000516306 88 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RNU2-44P-201ENST00000516795 194 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 RMST_8.1-201ENST00000610287 165 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 MIR6868-201ENST00000611215 58 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AL354798.1-201ENST00000622505 329 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
TRAV20A0A0B4J274 AC000403.1-201ENST00000613696 3585 ntBASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV20A0A0B4J274 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 SNORD35B-201ENST00000363660 87 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 SNORA72.2-201ENST00000365028 127 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MIR218-1-201ENST00000384999 110 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MIR548H3-201ENST00000408771 118 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 ELOCP21-201ENST00000412558 336 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 RAB28P5-201ENST00000427490 651 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 RPS12P18-201ENST00000442381 270 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC009237.7-201ENST00000447357 229 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 RNU6-344P-201ENST00000516635 111 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 SCARNA24.2-201ENST00000516968 130 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 SCARNA3-201ENST00000517097 143 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 CYCSP30-201ENST00000546447 172 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MIR3199-1-201ENST00000582434 88 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC008739.3-201ENST00000603262 127 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 SNORD11B-201ENST00000607707 90 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MIR7157-201ENST00000635801 60 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 AC010329.5-201ENST00000623497 2174 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRAV20A0A0B4J274 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 SNORA68.1-201ENST00000364537 132 ntBASIC3.32□□□□□ -1.88
TRAV20A0A0B4J274 Y_RNA.286-201ENST00000364813 102 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms