Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 AL137060.1-201ENST00000618151 2648 ntBASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PTCH2Q9Y6C5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTCH2Q9Y6C5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTCH2Q9Y6C5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.39■■□□□ 1.02
PTCH2Q9Y6C5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTCH2Q9Y6C5 PMS2P7-201ENST00000506558 1336 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 MCCD1P1-208ENST00000445732 328 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 FAM197Y8-203ENST00000450145 560 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 AC106730.1-201ENST00000566722 1090 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 AL390719.2-201ENST00000606993 987 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.39■■□□□ 1.01
PTCH2Q9Y6C5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 AL031284.1-201ENST00000419297 478 ntBASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.38■■□□□ 1.01
PTCH2Q9Y6C5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 NUS1P2-201ENST00000417358 873 ntBASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 TERC-201ENST00000602385 541 ntBASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 LINC02084-201ENST00000606069 1096 ntBASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
PTCH2Q9Y6C5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 MIR940-201ENST00000401276 94 ntBASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 AP003733.1-201ENST00000491725 852 ntBASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 RNPS1P1-201ENST00000507437 918 ntBASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 AC148477.8-201ENST00000624298 468 ntBASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCH2Q9Y6C5 AC243591.1-201ENST00000452967 1364 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms