Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
RIMBP3Q9UFD9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 C1orf229-201ENST00000623686 2258 ntBASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 CNN2P11-201ENST00000429351 262 ntBASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.17■■■□□ 2.42
RIMBP3Q9UFD9 TREX1-205ENST00000625293 1783 ntBASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 MCCD1P2-201ENST00000423228 335 ntBASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 UNC93B6-202ENST00000528242 690 ntBASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RIMBP3Q9UFD9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 OR7E14P-202ENST00000530490 1290 ntBASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 AC008735.5-201ENST00000623544 497 ntBASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC30.15■■■□□ 2.42
RIMBP3Q9UFD9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 AC011840.4-201ENST00000578471 627 ntBASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
RIMBP3Q9UFD9 CCS-201ENST00000310190 942 ntTSL 5 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 MIR4469-201ENST00000583919 79 ntBASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 AL162377.1-201ENST00000618844 1793 ntBASIC30.14■■■□□ 2.41
RIMBP3Q9UFD9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RIMBP3Q9UFD9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 AC005829.1-201ENST00000570002 483 ntBASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 AF228730.6-201ENST00000641497 218 ntBASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 AC084121.3-201ENST00000641716 218 ntBASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 AC105233.6-201ENST00000642093 218 ntBASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RIMBP3Q9UFD9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC30.11■■■□□ 2.41
RIMBP3Q9UFD9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms