Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 AC087289.5-201ENST00000586076 3175 ntBASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
ARHGEF38Q9NXL2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.72■□□□□ 0.75
ARHGEF38Q9NXL2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 AL161938.1-201ENST00000569833 2180 ntBASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF38Q9NXL2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 CA15P1-201ENST00000481698 905 ntBASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 AC073912.3-201ENST00000624414 853 ntBASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF38Q9NXL2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AC087499.1-201ENST00000418141 1075 ntBASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AC010947.1-201ENST00000623454 693 ntBASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 AC026471.1-201ENST00000564629 3026 ntBASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF38Q9NXL2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms