Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 FAM197Y8-203ENST00000450145 560 ntBASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF408Q9H9D4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF408Q9H9D4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 BX842568.4-201ENST00000421222 227 ntBASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 TERC-201ENST00000602385 541 ntBASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 AL390719.2-201ENST00000606993 987 ntBASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 AC104417.2-201ENST00000562989 1793 ntBASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF408Q9H9D4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 IGHV3-47-201ENST00000425060 335 ntBASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF408Q9H9D4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.22■■□□□ 1.15
ZNF408Q9H9D4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms