Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CD24P2-201ENST00000565486 219 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21■□□□□ 0.95
RNF39Q9H2S5 AC090373.1-201ENST00000623955 603 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 AC092865.7-201ENST00000641832 219 ntBASIC21■□□□□ 0.95
RNF39Q9H2S5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF39Q9H2S5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF39Q9H2S5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21■□□□□ 0.95
RNF39Q9H2S5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF39Q9H2S5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RNF39Q9H2S5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 KRT8P41-201ENST00000533985 1514 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 MTND2P31-201ENST00000512602 616 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 EGLN1P1-201ENST00000531623 762 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 C2orf69P3-201ENST00000565542 1120 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 AC122108.2-201ENST00000611946 526 ntBASIC20.99■□□□□ 0.95
RNF39Q9H2S5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF39Q9H2S5 MTND4P5-201ENST00000435821 1374 ntBASIC20.98■□□□□ 0.95
RNF39Q9H2S5 AC096733.2-201ENST00000609937 1394 ntBASIC20.98■□□□□ 0.95
RNF39Q9H2S5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 AC010203.1-204ENST00000548782 407 ntBASIC20.98■□□□□ 0.95
RNF39Q9H2S5 AC090116.1-201ENST00000615679 446 ntBASIC20.98■□□□□ 0.95
RNF39Q9H2S5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF39Q9H2S5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AL137013.1-201ENST00000432946 1228 ntBASIC20.97■□□□□ 0.95
RNF39Q9H2S5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AC011458.1-201ENST00000604034 617 ntBASIC20.97■□□□□ 0.95
RNF39Q9H2S5 MIR8084-201ENST00000614105 89 ntBASIC20.97■□□□□ 0.95
RNF39Q9H2S5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AL513185.3-201ENST00000433335 1300 ntBASIC20.97■□□□□ 0.95
RNF39Q9H2S5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF39Q9H2S5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms