Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA3CQ99985 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 AC087289.5-201ENST00000586076 3175 ntBASIC19.25■□□□□ 0.67
SEMA3CQ99985 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SEMA3CQ99985 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA3CQ99985 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA3CQ99985 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA3CQ99985 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 AC018445.3-201ENST00000624177 1945 ntBASIC19.24■□□□□ 0.67
SEMA3CQ99985 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 FITM1-202ENST00000559294 800 ntBASIC19.24■□□□□ 0.67
SEMA3CQ99985 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEMA3CQ99985 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
SEMA3CQ99985 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEMA3CQ99985 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.23■□□□□ 0.67
SEMA3CQ99985 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
SEMA3CQ99985 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.22■□□□□ 0.67
SEMA3CQ99985 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEMA3CQ99985 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SEMA3CQ99985 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEMA3CQ99985 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms