Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 CD177P1-201ENST00000606252 935 ntBASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 MIR6786-201ENST00000616843 113 ntBASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MS4A4EQ96PG1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 FAM207BP-201ENST00000447172 505 ntBASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MS4A4EQ96PG1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AP001412.1-201ENST00000608405 714 ntBASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AL031598.1-201ENST00000561511 1773 ntBASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 Z98044.1-201ENST00000632503 1764 ntBASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MS4A4EQ96PG1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 RPS2P55-201ENST00000397318 883 ntBASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 AC107956.1-201ENST00000494359 873 ntBASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms