Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCD1Q96GM5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AL023284.2-201ENST00000405850 579 ntBASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 BX664615.1-201ENST00000443558 458 ntBASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AC141257.4-201ENST00000634557 245 ntBASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AC136944.6-201ENST00000634818 245 ntBASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.93■□□□□ 0.78
SMARCD1Q96GM5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 AL512353.2-201ENST00000448759 1962 ntBASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 MCCD1P1-208ENST00000445732 328 ntBASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCD1Q96GM5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 AL161938.1-201ENST00000569833 2180 ntBASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCD1Q96GM5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms