Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 MIR4497-201ENST00000583208 89 ntBASIC19.36■□□□□ 0.69
RTP4Q96DX8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 Z99916.2-201ENST00000604037 246 ntBASIC19.36■□□□□ 0.69
RTP4Q96DX8 AC068587.9-201ENST00000641814 219 ntBASIC19.36■□□□□ 0.69
RTP4Q96DX8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.36■□□□□ 0.69
RTP4Q96DX8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTP4Q96DX8 KRT8P3-201ENST00000519669 1449 ntBASIC19.35■□□□□ 0.69
RTP4Q96DX8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 AC026271.3-201ENST00000571884 352 ntBASIC19.35■□□□□ 0.69
RTP4Q96DX8 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.35■□□□□ 0.69
RTP4Q96DX8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.35■□□□□ 0.69
RTP4Q96DX8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTP4Q96DX8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 AL353807.1-201ENST00000427475 662 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 AC091390.4-202ENST00000476426 537 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 AP002982.1-201ENST00000492365 877 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 AC135050.7-201ENST00000624508 2218 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RTP4Q96DX8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 KRT8P32-201ENST00000512863 1461 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.34■□□□□ 0.69
RTP4Q96DX8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTP4Q96DX8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RTP4Q96DX8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTP4Q96DX8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTP4Q96DX8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTP4Q96DX8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTP4Q96DX8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTP4Q96DX8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.33■□□□□ 0.68
RTP4Q96DX8 AC079598.2-202ENST00000546624 1451 ntBASIC19.33■□□□□ 0.68
RTP4Q96DX8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RTP4Q96DX8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RTP4Q96DX8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTP4Q96DX8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.33■□□□□ 0.68
RTP4Q96DX8 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
RTP4Q96DX8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTP4Q96DX8 BICD1-207ENST00000551848 1962 ntBASIC19.32■□□□□ 0.68
RTP4Q96DX8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTP4Q96DX8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTP4Q96DX8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTP4Q96DX8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.32■□□□□ 0.68
RTP4Q96DX8 RARRES2P10-201ENST00000564312 460 ntBASIC19.32■□□□□ 0.68
RTP4Q96DX8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms