Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PGBD4Q96DM1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 STARP1-201ENST00000397973 869 ntBASIC20.53■□□□□ 0.88
PGBD4Q96DM1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 FAM86EP-206ENST00000510506 987 ntBASIC20.53■□□□□ 0.88
PGBD4Q96DM1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
PGBD4Q96DM1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 PCED1CP-201ENST00000419887 785 ntBASIC20.52■□□□□ 0.88
PGBD4Q96DM1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 KRT18P38-201ENST00000449496 1282 ntBASIC20.52■□□□□ 0.88
PGBD4Q96DM1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD4Q96DM1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PGBD4Q96DM1 KRT8P3-201ENST00000519669 1449 ntBASIC20.52■□□□□ 0.87
PGBD4Q96DM1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PGBD4Q96DM1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PGBD4Q96DM1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
PGBD4Q96DM1 Z82202.1-201ENST00000623446 1880 ntBASIC20.52■□□□□ 0.87
PGBD4Q96DM1 GPAT2P1-201ENST00000444924 1672 ntBASIC20.51■□□□□ 0.87
PGBD4Q96DM1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD4Q96DM1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 TREX1-205ENST00000625293 1783 ntBASIC20.5■□□□□ 0.87
PGBD4Q96DM1 AL023284.2-201ENST00000405850 579 ntBASIC20.5■□□□□ 0.87
PGBD4Q96DM1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 AC112907.2-201ENST00000448639 330 ntBASIC20.5■□□□□ 0.87
PGBD4Q96DM1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD4Q96DM1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms