Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRG4Q92954 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRG4Q92954 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRG4Q92954 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PRG4Q92954 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PRG4Q92954 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
PRG4Q92954 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
PRG4Q92954 AC073648.2-201ENST00000510116 352 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 AC104390.1-201ENST00000555663 520 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 TERC-201ENST00000602385 541 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 AL049840.3-201ENST00000602669 611 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC30.15■■■□□ 2.42
PRG4Q92954 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PRG4Q92954 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC30.15■■■□□ 2.42
PRG4Q92954 KRT8P3-201ENST00000519669 1449 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC30.15■■■□□ 2.42
PRG4Q92954 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PRG4Q92954 AL691432.2-201ENST00000607222 2038 ntBASIC30.15■■■□□ 2.42
PRG4Q92954 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC30.14■■■□□ 2.42
PRG4Q92954 IGHGP-201ENST00000390555 1178 ntBASIC30.14■■■□□ 2.42
PRG4Q92954 AC005104.2-201ENST00000427818 678 ntBASIC30.14■■■□□ 2.42
PRG4Q92954 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC30.14■■■□□ 2.42
PRG4Q92954 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC30.14■■■□□ 2.42
PRG4Q92954 GAS2L1P1-201ENST00000420145 1480 ntBASIC30.14■■■□□ 2.42
PRG4Q92954 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PRG4Q92954 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC30.14■■■□□ 2.41
PRG4Q92954 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC30.13■■■□□ 2.41
PRG4Q92954 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC30.13■■■□□ 2.41
PRG4Q92954 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.13■■■□□ 2.41
PRG4Q92954 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC30.13■■■□□ 2.41
PRG4Q92954 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 ZNF815P-204ENST00000434898 1737 ntBASIC30.13■■■□□ 2.41
PRG4Q92954 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PRG4Q92954 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC30.13■■■□□ 2.41
PRG4Q92954 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC30.13■■■□□ 2.41
PRG4Q92954 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC30.13■■■□□ 2.41
PRG4Q92954 PIN1-206ENST00000587625 878 ntTSL 2 BASIC30.13■■■□□ 2.41
PRG4Q92954 AL355385.1-201ENST00000606123 409 ntBASIC30.13■■■□□ 2.41
PRG4Q92954 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC30.12■■■□□ 2.41
PRG4Q92954 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC30.12■■■□□ 2.41
PRG4Q92954 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
PRG4Q92954 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
PRG4Q92954 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC30.12■■■□□ 2.41
PRG4Q92954 AF186996.4-201ENST00000467186 377 ntBASIC30.12■■■□□ 2.41
PRG4Q92954 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PRG4Q92954 LINC02084-201ENST00000606069 1096 ntBASIC30.12■■■□□ 2.41
PRG4Q92954 AC124864.1-201ENST00000623408 392 ntBASIC30.12■■■□□ 2.41
PRG4Q92954 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC30.12■■■□□ 2.41
PRG4Q92954 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.12■■■□□ 2.41
PRG4Q92954 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC30.11■■■□□ 2.41
PRG4Q92954 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PRG4Q92954 GGCT-205ENST00000409436 954 ntTSL 3 BASIC30.11■■■□□ 2.41
PRG4Q92954 PGAM5P1-201ENST00000518923 814 ntBASIC30.11■■■□□ 2.41
PRG4Q92954 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC30.11■■■□□ 2.41
PRG4Q92954 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC30.11■■■□□ 2.41
PRG4Q92954 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC30.11■■■□□ 2.41
PRG4Q92954 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC30.11■■■□□ 2.41
PRG4Q92954 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC30.11■■■□□ 2.41
PRG4Q92954 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PRG4Q92954 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PRG4Q92954 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC30.1■■■□□ 2.41
PRG4Q92954 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC30.1■■■□□ 2.41
PRG4Q92954 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 HOXB1-202ENST00000577092 1414 ntBASIC30.1■■■□□ 2.41
PRG4Q92954 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRG4Q92954 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC30.1■■■□□ 2.41
PRG4Q92954 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC30.1■■■□□ 2.41
PRG4Q92954 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
PRG4Q92954 SDHAP1-207ENST00000440850 2000 ntBASIC30.09■■■□□ 2.41
PRG4Q92954 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
PRG4Q92954 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC30.09■■■□□ 2.41
PRG4Q92954 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.09■■■□□ 2.41
PRG4Q92954 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
PRG4Q92954 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC30.09■■■□□ 2.41
PRG4Q92954 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
PRG4Q92954 AC055717.3-201ENST00000622967 595 ntBASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms