Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.75■■□□□ 1.55
RTF1Q92541 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 AL023284.2-201ENST00000405850 579 ntBASIC24.75■■□□□ 1.55
RTF1Q92541 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.75■■□□□ 1.55
RTF1Q92541 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC24.75■■□□□ 1.55
RTF1Q92541 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTF1Q92541 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.75■■□□□ 1.55
RTF1Q92541 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.74■■□□□ 1.55
RTF1Q92541 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.74■■□□□ 1.55
RTF1Q92541 HOMER2P1-201ENST00000455653 964 ntBASIC24.74■■□□□ 1.55
RTF1Q92541 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.74■■□□□ 1.55
RTF1Q92541 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.74■■□□□ 1.55
RTF1Q92541 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.74■■□□□ 1.55
RTF1Q92541 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.74■■□□□ 1.55
RTF1Q92541 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
RTF1Q92541 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.74■■□□□ 1.55
RTF1Q92541 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
RTF1Q92541 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTF1Q92541 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
RTF1Q92541 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.73■■□□□ 1.55
RTF1Q92541 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTF1Q92541 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
RTF1Q92541 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTF1Q92541 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTF1Q92541 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.73■■□□□ 1.55
RTF1Q92541 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.73■■□□□ 1.55
RTF1Q92541 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.73■■□□□ 1.55
RTF1Q92541 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.73■■□□□ 1.55
RTF1Q92541 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.73■■□□□ 1.55
RTF1Q92541 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
RTF1Q92541 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTF1Q92541 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTF1Q92541 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.73■■□□□ 1.55
RTF1Q92541 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.72■■□□□ 1.55
RTF1Q92541 FEM1AP3-201ENST00000403722 1741 ntBASIC24.72■■□□□ 1.55
RTF1Q92541 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
RTF1Q92541 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.72■■□□□ 1.55
RTF1Q92541 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.72■■□□□ 1.55
RTF1Q92541 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RTF1Q92541 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.72■■□□□ 1.55
RTF1Q92541 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 MCCD1P1-208ENST00000445732 328 ntBASIC24.72■■□□□ 1.55
RTF1Q92541 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.72■■□□□ 1.55
RTF1Q92541 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTF1Q92541 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.71■■□□□ 1.55
RTF1Q92541 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.71■■□□□ 1.55
RTF1Q92541 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.71■■□□□ 1.55
RTF1Q92541 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.71■■□□□ 1.55
RTF1Q92541 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.71■■□□□ 1.55
RTF1Q92541 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.71■■□□□ 1.55
RTF1Q92541 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.71■■□□□ 1.55
RTF1Q92541 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC24.71■■□□□ 1.55
RTF1Q92541 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTF1Q92541 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RTF1Q92541 IRX1P1-201ENST00000438849 1838 ntBASIC24.7■■□□□ 1.55
RTF1Q92541 AC141586.3-201ENST00000562166 1838 ntBASIC24.7■■□□□ 1.55
RTF1Q92541 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTF1Q92541 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
RTF1Q92541 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms