Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 EED-207ENST00000528180 1745 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 OR7E14P-202ENST00000530490 1290 ntBASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AC138932.3-201ENST00000567634 1902 ntBASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 KRT18P27-201ENST00000427733 1299 ntBASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC7.68□□□□□ -1.18
SYNE2Q8WXH0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 LINC01126-201ENST00000623515 1646 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AP005117.1-201ENST00000584346 1413 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 NUS1P2-201ENST00000417358 873 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AC018845.2-201ENST00000568326 409 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 TBC1D3P2-202ENST00000577902 1649 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 MIR6805-201ENST00000615055 62 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 AC023141.5-201ENST00000458585 616 ntBASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
SYNE2Q8WXH0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE2Q8WXH0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE2Q8WXH0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE2Q8WXH0 KRT18P23-201ENST00000435622 1283 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms