Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 FAM197Y8-203ENST00000450145 560 ntBASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 AC139887.3-201ENST00000568585 713 ntBASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 AL139424.1-201ENST00000607572 797 ntBASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 AC008608.2-201ENST00000606089 416 ntBASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ALMS1Q8TCU4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 AC009065.1-201ENST00000564055 1225 ntBASIC12.77□□□□□ -0.36
ALMS1Q8TCU4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 FGFR3P6-201ENST00000457012 610 ntBASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 AC005336.2-201ENST00000593183 939 ntBASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 AC140113.2-201ENST00000604370 208 ntBASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ALMS1Q8TCU4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 KRT8P3-201ENST00000519669 1449 ntBASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.76□□□□□ -0.37
ALMS1Q8TCU4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms