Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
FNDC9Q8TBE3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 INGX-201ENST00000359239 846 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 RCN1P1-201ENST00000400413 996 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 CCR12P-201ENST00000446203 998 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 AC128688.1-201ENST00000487626 519 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 AC116562.4-202ENST00000641738 218 ntBASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.06■□□□□ 0.32
FNDC9Q8TBE3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 AC113347.1-201ENST00000413321 391 ntBASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 TSPY23P-201ENST00000440136 739 ntBASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.05■□□□□ 0.32
FNDC9Q8TBE3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 AC018445.3-201ENST00000624177 1945 ntBASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 TSPY21P-201ENST00000433481 731 ntBASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNDC9Q8TBE3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNDC9Q8TBE3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNDC9Q8TBE3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FNDC9Q8TBE3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FNDC9Q8TBE3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms