Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC079602.3-201ENST00000623931 403 ntBASIC14.75□□□□□ -0.05
LINC01006Q8NI28 AL157888.1-201ENST00000631930 593 ntBASIC14.75□□□□□ -0.05
LINC01006Q8NI28 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 AL162741.1-201ENST00000565563 1558 ntBASIC14.75□□□□□ -0.05
LINC01006Q8NI28 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC01006Q8NI28 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 HLA-F-220ENST00000434407 884 ntBASIC14.74□□□□□ -0.05
LINC01006Q8NI28 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 KRT8P26-201ENST00000534154 1276 ntBASIC14.74□□□□□ -0.05
LINC01006Q8NI28 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MIR3180-1-201ENST00000580374 94 ntBASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MIR3917-201ENST00000580971 93 ntBASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MIR3180-3-201ENST00000584616 94 ntBASIC14.74□□□□□ -0.05
LINC01006Q8NI28 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC01006Q8NI28 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 AP002383.4-201ENST00000442518 975 ntBASIC14.73□□□□□ -0.05
LINC01006Q8NI28 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 AL136038.4-201ENST00000603606 1261 ntBASIC14.73□□□□□ -0.05
LINC01006Q8NI28 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01006Q8NI28 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 Z82202.1-201ENST00000623446 1880 ntBASIC14.72□□□□□ -0.05
LINC01006Q8NI28 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 AL391807.1-203ENST00000604392 2365 ntBASIC14.72□□□□□ -0.05
LINC01006Q8NI28 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 RN7SL510P-201ENST00000581311 263 ntBASIC14.72□□□□□ -0.05
LINC01006Q8NI28 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 AP002414.4-201ENST00000589764 1148 ntBASIC14.72□□□□□ -0.05
LINC01006Q8NI28 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms