Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 AC233263.1-201ENST00000578059 224 ntBASIC18.53■□□□□ 0.56
CPSF7Q8N684 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPSF7Q8N684 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.53■□□□□ 0.56
CPSF7Q8N684 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.56
CPSF7Q8N684 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 AL359736.2-201ENST00000621992 437 ntBASIC18.52■□□□□ 0.56
CPSF7Q8N684 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CPSF7Q8N684 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPSF7Q8N684 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPSF7Q8N684 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPSF7Q8N684 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CPSF7Q8N684 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.52■□□□□ 0.55
CPSF7Q8N684 ANO7L1-203ENST00000602586 1720 ntBASIC18.52■□□□□ 0.55
CPSF7Q8N684 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 C1QBPP2-201ENST00000528754 825 ntBASIC18.51■□□□□ 0.55
CPSF7Q8N684 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 AC069544.1-201ENST00000609399 999 ntBASIC18.51■□□□□ 0.55
CPSF7Q8N684 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPSF7Q8N684 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.51■□□□□ 0.55
CPSF7Q8N684 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 FAM197Y4-202ENST00000622692 608 ntBASIC18.5■□□□□ 0.55
CPSF7Q8N684 AC083906.6-201ENST00000641366 219 ntBASIC18.5■□□□□ 0.55
CPSF7Q8N684 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CPSF7Q8N684 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPSF7Q8N684 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms