Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 KRT18P38-201ENST00000449496 1282 ntBASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 GCSHP2-201ENST00000560971 527 ntBASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 AC116407.4-201ENST00000623319 1061 ntBASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
C9orf139Q6ZV77 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C9orf139Q6ZV77 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 SDHAP1-207ENST00000440850 2000 ntBASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 AC005332.1-201ENST00000577698 1310 ntBASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 HYMAI.1-201ENST00000620949 238 ntBASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C9orf139Q6ZV77 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 KRT8P3-201ENST00000519669 1449 ntBASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 AC112907.2-201ENST00000448639 330 ntBASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 AC034232.1-201ENST00000506026 1064 ntBASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ZNF444P1-201ENST00000559497 298 ntBASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms