Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 AC236430.1-201ENST00000402231 743 ntBASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 KRT18P2-201ENST00000447938 1258 ntBASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 CEND1P1-201ENST00000451006 455 ntBASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 TERF1P3-201ENST00000505638 1227 ntBASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL13A1Q5TAT6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 AP002414.3-201ENST00000589352 1468 ntBASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 IGHGP-201ENST00000390555 1178 ntBASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 RCN1P2-201ENST00000398357 915 ntBASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL13A1Q5TAT6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.33■■□□□ 1
COL13A1Q5TAT6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL13A1Q5TAT6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 ELL2P1-201ENST00000413990 1906 ntBASIC21.32■■□□□ 1
COL13A1Q5TAT6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL13A1Q5TAT6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL13A1Q5TAT6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.31■■□□□ 1
COL13A1Q5TAT6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 AC105339.3-201ENST00000560043 636 ntBASIC21.31■■□□□ 1
COL13A1Q5TAT6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL13A1Q5TAT6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL13A1Q5TAT6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL13A1Q5TAT6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL13A1Q5TAT6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 PMS2P4-201ENST00000412466 1052 ntBASIC21.3■■□□□ 1
COL13A1Q5TAT6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 RNA5SP421-201ENST00000516864 134 ntBASIC21.3■■□□□ 1
COL13A1Q5TAT6 AP005018.1-201ENST00000525475 301 ntBASIC21.3■■□□□ 1
COL13A1Q5TAT6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 AL078644.1-201ENST00000609881 752 ntBASIC21.3■■□□□ 1
COL13A1Q5TAT6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL13A1Q5TAT6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL13A1Q5TAT6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.3■■□□□ 1
COL13A1Q5TAT6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL13A1Q5TAT6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 PHGDH-210ENST00000641115 1638 ntBASIC21.29■■□□□ 1
COL13A1Q5TAT6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 AP002414.1-201ENST00000391405 1147 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms