Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.77■■□□□ 1.08
USH1GQ495M9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
USH1GQ495M9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.77■■□□□ 1.08
USH1GQ495M9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USH1GQ495M9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.77■■□□□ 1.08
USH1GQ495M9 TSPY5P-201ENST00000426936 936 ntBASIC21.77■■□□□ 1.08
USH1GQ495M9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.77■■□□□ 1.08
USH1GQ495M9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.77■■□□□ 1.08
USH1GQ495M9 AL441883.1-201ENST00000566170 1045 ntBASIC21.77■■□□□ 1.08
USH1GQ495M9 AC140113.3-201ENST00000605663 199 ntBASIC21.77■■□□□ 1.08
USH1GQ495M9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
USH1GQ495M9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.77■■□□□ 1.08
USH1GQ495M9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
USH1GQ495M9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
USH1GQ495M9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.77■■□□□ 1.08
USH1GQ495M9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
USH1GQ495M9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.77■■□□□ 1.07
USH1GQ495M9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
USH1GQ495M9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
USH1GQ495M9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
USH1GQ495M9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.76■■□□□ 1.07
USH1GQ495M9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
USH1GQ495M9 AC092647.4-201ENST00000457211 535 ntBASIC21.76■■□□□ 1.07
USH1GQ495M9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.76■■□□□ 1.07
USH1GQ495M9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.76■■□□□ 1.07
USH1GQ495M9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.76■■□□□ 1.07
USH1GQ495M9 CR769767.2-201ENST00000622735 460 ntBASIC21.76■■□□□ 1.07
USH1GQ495M9 AL032819.2-201ENST00000624543 2162 ntBASIC21.76■■□□□ 1.07
USH1GQ495M9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
USH1GQ495M9 IRX1P1-201ENST00000438849 1838 ntBASIC21.76■■□□□ 1.07
USH1GQ495M9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
USH1GQ495M9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.75■■□□□ 1.07
USH1GQ495M9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.75■■□□□ 1.07
USH1GQ495M9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.75■■□□□ 1.07
USH1GQ495M9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.75■■□□□ 1.07
USH1GQ495M9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
USH1GQ495M9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.74■■□□□ 1.07
USH1GQ495M9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.74■■□□□ 1.07
USH1GQ495M9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
USH1GQ495M9 AL023284.2-201ENST00000405850 579 ntBASIC21.74■■□□□ 1.07
USH1GQ495M9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.74■■□□□ 1.07
USH1GQ495M9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.74■■□□□ 1.07
USH1GQ495M9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.74■■□□□ 1.07
USH1GQ495M9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.74■■□□□ 1.07
USH1GQ495M9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.74■■□□□ 1.07
USH1GQ495M9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.74■■□□□ 1.07
USH1GQ495M9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
USH1GQ495M9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
USH1GQ495M9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
USH1GQ495M9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.74■■□□□ 1.07
USH1GQ495M9 AC036111.1-201ENST00000533973 1582 ntBASIC21.74■■□□□ 1.07
USH1GQ495M9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
USH1GQ495M9 AC141586.3-201ENST00000562166 1838 ntBASIC21.73■■□□□ 1.07
USH1GQ495M9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.73■■□□□ 1.07
USH1GQ495M9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
USH1GQ495M9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms