Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH17Q12864 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.17■□□□□ 0.66
CDH17Q12864 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH17Q12864 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH17Q12864 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH17Q12864 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 AC091390.4-202ENST00000476426 537 ntBASIC19.16■□□□□ 0.66
CDH17Q12864 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH17Q12864 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH17Q12864 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.16■□□□□ 0.66
CDH17Q12864 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH17Q12864 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH17Q12864 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH17Q12864 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH17Q12864 PRORSD1P-201ENST00000295112 541 ntBASIC19.15■□□□□ 0.66
CDH17Q12864 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH17Q12864 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH17Q12864 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH17Q12864 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH17Q12864 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH17Q12864 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH17Q12864 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH17Q12864 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH17Q12864 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 AL135905.2-201ENST00000584934 1404 ntBASIC19.15■□□□□ 0.66
CDH17Q12864 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH17Q12864 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH17Q12864 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDH17Q12864 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CDH17Q12864 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH17Q12864 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH17Q12864 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH17Q12864 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.14■□□□□ 0.65
CDH17Q12864 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH17Q12864 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDH17Q12864 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH17Q12864 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CDH17Q12864 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH17Q12864 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CDH17Q12864 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CDH17Q12864 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH17Q12864 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDH17Q12864 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH17Q12864 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDH17Q12864 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDH17Q12864 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH17Q12864 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDH17Q12864 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH17Q12864 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 AC142381.4-202ENST00000563973 229 ntBASIC19.13■□□□□ 0.65
CDH17Q12864 AC011298.2-201ENST00000617989 482 ntBASIC19.13■□□□□ 0.65
CDH17Q12864 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.13■□□□□ 0.65
CDH17Q12864 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.13■□□□□ 0.65
CDH17Q12864 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH17Q12864 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH17Q12864 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms