Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP3CAQ08209 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 KRT8P3-201ENST00000519669 1449 ntBASIC20.49■□□□□ 0.87
PPP3CAQ08209 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PPP3CAQ08209 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.49■□□□□ 0.87
PPP3CAQ08209 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.49■□□□□ 0.87
PPP3CAQ08209 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPP3CAQ08209 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 CRYGFP-201ENST00000418459 633 ntBASIC20.48■□□□□ 0.87
PPP3CAQ08209 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 AC083906.6-201ENST00000641366 219 ntBASIC20.48■□□□□ 0.87
PPP3CAQ08209 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPP3CAQ08209 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.48■□□□□ 0.87
PPP3CAQ08209 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 AL512353.2-201ENST00000448759 1962 ntBASIC20.47■□□□□ 0.87
PPP3CAQ08209 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 AP000525.1-201ENST00000608286 694 ntBASIC20.47■□□□□ 0.87
PPP3CAQ08209 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPP3CAQ08209 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.47■□□□□ 0.87
PPP3CAQ08209 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.47■□□□□ 0.87
PPP3CAQ08209 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 AL031598.1-201ENST00000561511 1773 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 AC120498.9-201ENST00000339021 3867 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 UNC93B2-201ENST00000285383 730 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 AL390955.1-201ENST00000428694 934 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 KRT17P2-201ENST00000300992 1314 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 AC093525.10-201ENST00000625130 1569 ntBASIC20.46■□□□□ 0.87
PPP3CAQ08209 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPP3CAQ08209 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
PPP3CAQ08209 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
PPP3CAQ08209 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PPP3CAQ08209 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CAQ08209 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.45■□□□□ 0.86
PPP3CAQ08209 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CAQ08209 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CAQ08209 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPP3CAQ08209 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CAQ08209 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPP3CAQ08209 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPP3CAQ08209 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms