Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 AC239809.2-201ENST00000415381 517 ntBASIC16.34■□□□□ 0.21
UBA52P62987 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA52P62987 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.34■□□□□ 0.21
UBA52P62987 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 AC124016.1-201ENST00000609552 612 ntBASIC16.34■□□□□ 0.21
UBA52P62987 AL023875.1-201ENST00000640777 796 ntBASIC16.34■□□□□ 0.21
UBA52P62987 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.34■□□□□ 0.21
UBA52P62987 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBA52P62987 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBA52P62987 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBA52P62987 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.34■□□□□ 0.21
UBA52P62987 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBA52P62987 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBA52P62987 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBA52P62987 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.33■□□□□ 0.21
UBA52P62987 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
UBA52P62987 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBA52P62987 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.33■□□□□ 0.21
UBA52P62987 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBA52P62987 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
UBA52P62987 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.21
UBA52P62987 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UBA52P62987 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 TSPY7P-201ENST00000431358 1114 ntBASIC16.33■□□□□ 0.2
UBA52P62987 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.33■□□□□ 0.2
UBA52P62987 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.33■□□□□ 0.2
UBA52P62987 AC133681.1-201ENST00000465482 601 ntBASIC16.33■□□□□ 0.2
UBA52P62987 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.33■□□□□ 0.2
UBA52P62987 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UBA52P62987 AP001412.1-201ENST00000608405 714 ntBASIC16.33■□□□□ 0.2
UBA52P62987 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 AC087633.2-202ENST00000565166 1439 ntBASIC16.33■□□□□ 0.2
UBA52P62987 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBA52P62987 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 AC090164.3-201ENST00000610780 2143 ntBASIC16.33■□□□□ 0.2
UBA52P62987 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBA52P62987 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
UBA52P62987 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UBA52P62987 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
UBA52P62987 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.32■□□□□ 0.2
UBA52P62987 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
UBA52P62987 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.32■□□□□ 0.2
UBA52P62987 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 AC120498.8-201ENST00000614275 531 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms