Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 AL023284.2-201ENST00000405850 579 ntBASIC18.73■□□□□ 0.59
CLDN2P57739 PCED1CP-201ENST00000419887 785 ntBASIC18.73■□□□□ 0.59
CLDN2P57739 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN2P57739 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN2P57739 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN2P57739 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN2P57739 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN2P57739 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN2P57739 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLDN2P57739 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN2P57739 AC036111.1-201ENST00000533973 1582 ntBASIC18.72■□□□□ 0.59
CLDN2P57739 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN2P57739 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLDN2P57739 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN2P57739 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN2P57739 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN2P57739 AC112907.2-201ENST00000448639 330 ntBASIC18.72■□□□□ 0.59
CLDN2P57739 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN2P57739 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN2P57739 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN2P57739 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN2P57739 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN2P57739 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN2P57739 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN2P57739 AL121956.5-201ENST00000625261 221 ntBASIC18.72■□□□□ 0.59
CLDN2P57739 AP000550.4-202ENST00000639755 178 ntBASIC18.72■□□□□ 0.59
CLDN2P57739 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN2P57739 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN2P57739 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN2P57739 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN2P57739 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLDN2P57739 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 TEX21P-204ENST00000641479 1693 ntBASIC18.71■□□□□ 0.59
CLDN2P57739 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN2P57739 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN2P57739 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CLDN2P57739 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLDN2P57739 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN2P57739 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN2P57739 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLDN2P57739 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLDN2P57739 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 SPDYE15P-201ENST00000424157 909 ntBASIC18.7■□□□□ 0.58
CLDN2P57739 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN2P57739 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN2P57739 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN2P57739 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN2P57739 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN2P57739 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN2P57739 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN2P57739 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN2P57739 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN2P57739 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN2P57739 IER3-202ENST00000376377 1350 ntBASIC18.69■□□□□ 0.58
CLDN2P57739 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms