Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH8P55286 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH8P55286 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH8P55286 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH8P55286 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH8P55286 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH8P55286 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH8P55286 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH8P55286 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH8P55286 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CDH8P55286 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 AL353719.1-201ENST00000566847 864 ntBASIC20.23■□□□□ 0.83
CDH8P55286 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.23■□□□□ 0.83
CDH8P55286 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH8P55286 AC116562.4-202ENST00000641738 218 ntBASIC20.23■□□□□ 0.83
CDH8P55286 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH8P55286 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH8P55286 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH8P55286 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH8P55286 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH8P55286 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH8P55286 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 CCR12P-201ENST00000446203 998 ntBASIC20.22■□□□□ 0.83
CDH8P55286 AP003041.3-201ENST00000527151 707 ntBASIC20.22■□□□□ 0.83
CDH8P55286 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH8P55286 LINC01023-201ENST00000606054 436 ntBASIC20.22■□□□□ 0.83
CDH8P55286 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH8P55286 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH8P55286 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH8P55286 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CDH8P55286 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH8P55286 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH8P55286 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH8P55286 AC120498.9-201ENST00000339021 3867 ntBASIC20.21■□□□□ 0.83
CDH8P55286 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 KRT8P3-201ENST00000519669 1449 ntBASIC20.21■□□□□ 0.83
CDH8P55286 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CDH8P55286 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH8P55286 TSPY17P-201ENST00000450329 467 ntBASIC20.21■□□□□ 0.83
CDH8P55286 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH8P55286 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH8P55286 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH8P55286 FAM87A-204ENST00000613235 858 ntBASIC20.21■□□□□ 0.83
CDH8P55286 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH8P55286 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH8P55286 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH8P55286 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH8P55286 KRT18P22-201ENST00000402024 1347 ntBASIC20.21■□□□□ 0.83
CDH8P55286 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH8P55286 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH8P55286 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
CDH8P55286 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH8P55286 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDH8P55286 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDH8P55286 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDH8P55286 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH8P55286 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH8P55286 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH8P55286 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.2■□□□□ 0.82
CDH8P55286 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDH8P55286 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms