Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN2P17655 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPN2P17655 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 Z85996.1-201ENST00000494644 937 ntBASIC21.78■■□□□ 1.08
CAPN2P17655 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CAPN2P17655 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CAPN2P17655 AC092329.2-201ENST00000598402 547 ntBASIC21.78■■□□□ 1.08
CAPN2P17655 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 AC012313.10-201ENST00000623509 926 ntBASIC21.78■■□□□ 1.08
CAPN2P17655 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.78■■□□□ 1.08
CAPN2P17655 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN2P17655 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.78■■□□□ 1.08
CAPN2P17655 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN2P17655 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN2P17655 NUS1P1-201ENST00000446295 882 ntBASIC21.77■■□□□ 1.08
CAPN2P17655 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.77■■□□□ 1.08
CAPN2P17655 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.77■■□□□ 1.08
CAPN2P17655 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.77■■□□□ 1.08
CAPN2P17655 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN2P17655 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN2P17655 AC018553.1-201ENST00000616682 1458 ntBASIC21.77■■□□□ 1.07
CAPN2P17655 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.77■■□□□ 1.07
CAPN2P17655 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN2P17655 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CAPN2P17655 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CAPN2P17655 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN2P17655 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CAPN2P17655 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN2P17655 PVRIG2P-201ENST00000435460 978 ntBASIC21.76■■□□□ 1.07
CAPN2P17655 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
CAPN2P17655 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.76■■□□□ 1.07
CAPN2P17655 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.76■■□□□ 1.07
CAPN2P17655 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN2P17655 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN2P17655 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN2P17655 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN2P17655 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CAPN2P17655 TSPY21P-201ENST00000433481 731 ntBASIC21.75■■□□□ 1.07
CAPN2P17655 TSPY23P-201ENST00000440136 739 ntBASIC21.75■■□□□ 1.07
CAPN2P17655 AP003041.3-201ENST00000527151 707 ntBASIC21.75■■□□□ 1.07
CAPN2P17655 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN2P17655 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.75■■□□□ 1.07
CAPN2P17655 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN2P17655 AC098818.2-201ENST00000564925 2320 ntBASIC21.75■■□□□ 1.07
CAPN2P17655 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CAPN2P17655 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.75■■□□□ 1.07
CAPN2P17655 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN2P17655 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN2P17655 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CAPN2P17655 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 AP005212.1-201ENST00000581547 1997 ntBASIC21.74■■□□□ 1.07
CAPN2P17655 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN2P17655 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CAPN2P17655 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.74■■□□□ 1.07
CAPN2P17655 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN2P17655 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms