Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SP9P0CG40 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
SP9P0CG40 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.69■□□□□ 0.58
SP9P0CG40 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SP9P0CG40 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SP9P0CG40 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 IGHGP-201ENST00000390555 1178 ntBASIC18.68■□□□□ 0.58
SP9P0CG40 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 POM121L3P-201ENST00000419331 1163 ntBASIC18.68■□□□□ 0.58
SP9P0CG40 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.68■□□□□ 0.58
SP9P0CG40 AC091607.1-201ENST00000490318 1060 ntBASIC18.68■□□□□ 0.58
SP9P0CG40 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.68■□□□□ 0.58
SP9P0CG40 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 AL049840.3-201ENST00000602669 611 ntBASIC18.68■□□□□ 0.58
SP9P0CG40 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.68■□□□□ 0.58
SP9P0CG40 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.68■□□□□ 0.58
SP9P0CG40 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SP9P0CG40 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SP9P0CG40 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.68■□□□□ 0.58
SP9P0CG40 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.67■□□□□ 0.58
SP9P0CG40 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SP9P0CG40 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.67■□□□□ 0.58
SP9P0CG40 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.67■□□□□ 0.58
SP9P0CG40 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.67■□□□□ 0.58
SP9P0CG40 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.67■□□□□ 0.58
SP9P0CG40 AL591684.3-201ENST00000605187 298 ntBASIC18.67■□□□□ 0.58
SP9P0CG40 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.67■□□□□ 0.58
SP9P0CG40 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SP9P0CG40 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.67■□□□□ 0.58
SP9P0CG40 AP005212.1-201ENST00000581547 1997 ntBASIC18.67■□□□□ 0.58
SP9P0CG40 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.67■□□□□ 0.58
SP9P0CG40 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.67■□□□□ 0.58
SP9P0CG40 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SP9P0CG40 KRT8P3-201ENST00000519669 1449 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 KRT8P7-201ENST00000533003 1432 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.66■□□□□ 0.58
SP9P0CG40 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
SP9P0CG40 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.66■□□□□ 0.58
SP9P0CG40 AC018712.1-201ENST00000455767 687 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.66■□□□□ 0.58
SP9P0CG40 AC027796.2-201ENST00000575326 344 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.66■□□□□ 0.58
SP9P0CG40 AC140113.2-201ENST00000604370 208 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 MIR7706-201ENST00000613747 67 ntBASIC18.66■□□□□ 0.58
SP9P0CG40 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.66■□□□□ 0.58
SP9P0CG40 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SP9P0CG40 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
SP9P0CG40 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.66■□□□□ 0.58
SP9P0CG40 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.66■□□□□ 0.58
SP9P0CG40 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SP9P0CG40 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.65■□□□□ 0.58
SP9P0CG40 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.65■□□□□ 0.58
SP9P0CG40 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.65■□□□□ 0.58
SP9P0CG40 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.65■□□□□ 0.58
SP9P0CG40 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.65■□□□□ 0.58
SP9P0CG40 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.65■□□□□ 0.58
SP9P0CG40 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SP9P0CG40 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.65■□□□□ 0.58
SP9P0CG40 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms