Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN1O95832 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN1O95832 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN1O95832 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN1O95832 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN1O95832 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN1O95832 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
CLDN1O95832 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN1O95832 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN1O95832 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 AC016734.2-201ENST00000624325 1377 ntBASIC16.91■□□□□ 0.3
CLDN1O95832 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN1O95832 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLDN1O95832 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN1O95832 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN1O95832 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 HBZP1-201ENST00000354915 429 ntBASIC16.91■□□□□ 0.3
CLDN1O95832 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLDN1O95832 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.91■□□□□ 0.3
CLDN1O95832 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN1O95832 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN1O95832 AL160237.2-201ENST00000556165 472 ntBASIC16.91■□□□□ 0.3
CLDN1O95832 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN1O95832 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN1O95832 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN1O95832 FP700111.2-201ENST00000619190 1892 ntBASIC16.9■□□□□ 0.3
CLDN1O95832 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLDN1O95832 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN1O95832 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN1O95832 AP002383.4-201ENST00000442518 975 ntBASIC16.9■□□□□ 0.3
CLDN1O95832 NUS1P1-201ENST00000446295 882 ntBASIC16.9■□□□□ 0.3
CLDN1O95832 AC079781.3-201ENST00000449110 356 ntBASIC16.9■□□□□ 0.3
CLDN1O95832 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN1O95832 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN1O95832 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CLDN1O95832 AL732292.2-201ENST00000609649 430 ntBASIC16.9■□□□□ 0.3
CLDN1O95832 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLDN1O95832 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CLDN1O95832 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN1O95832 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN1O95832 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN1O95832 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CLDN1O95832 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.89■□□□□ 0.3
CLDN1O95832 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN1O95832 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN1O95832 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CLDN1O95832 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDN1O95832 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN1O95832 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN1O95832 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDN1O95832 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 BX276092.5-203ENST00000456199 560 ntBASIC16.89■□□□□ 0.29
CLDN1O95832 AC079776.4-201ENST00000511039 504 ntBASIC16.89■□□□□ 0.29
CLDN1O95832 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CLDN1O95832 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN1O95832 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN1O95832 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CLDN1O95832 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms