Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SLC25A1P4-201ENST00000567977 778 ntBASIC17.52■□□□□ 0.4
NKX2-2O95096 MIR4785-201ENST00000585005 73 ntBASIC17.52■□□□□ 0.4
NKX2-2O95096 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.52■□□□□ 0.4
NKX2-2O95096 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-2O95096 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
NKX2-2O95096 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX2-2O95096 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-2O95096 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NKX2-2O95096 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX2-2O95096 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
NKX2-2O95096 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX2-2O95096 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 AC120498.9-201ENST00000339021 3867 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX2-2O95096 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NKX2-2O95096 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX2-2O95096 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 Z98044.1-201ENST00000632503 1764 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 TSPY7P-201ENST00000431358 1114 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 MFAP1P1-201ENST00000442257 1255 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NKX2-2O95096 AC097488.1-201ENST00000507834 756 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX2-2O95096 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.51■□□□□ 0.39
NKX2-2O95096 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.51■□□□□ 0.39
NKX2-2O95096 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NKX2-2O95096 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX2-2O95096 AL512353.2-201ENST00000448759 1962 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NKX2-2O95096 AL138781.2-201ENST00000617896 1843 ntBASIC17.51■□□□□ 0.39
NKX2-2O95096 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-2O95096 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 KRT8P32-201ENST00000512863 1461 ntBASIC17.5■□□□□ 0.39
NKX2-2O95096 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX2-2O95096 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
NKX2-2O95096 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX2-2O95096 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.5■□□□□ 0.39
NKX2-2O95096 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.5■□□□□ 0.39
NKX2-2O95096 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NKX2-2O95096 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX2-2O95096 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
NKX2-2O95096 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.5■□□□□ 0.39
NKX2-2O95096 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NKX2-2O95096 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-2O95096 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX2-2O95096 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX2-2O95096 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
NKX2-2O95096 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.49■□□□□ 0.39
NKX2-2O95096 HEIH-201ENST00000623091 1652 ntBASIC17.49■□□□□ 0.39
NKX2-2O95096 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-2O95096 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.49■□□□□ 0.39
NKX2-2O95096 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 AP005242.2-201ENST00000580065 1175 ntBASIC17.49■□□□□ 0.39
NKX2-2O95096 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 AC068587.9-201ENST00000641814 219 ntBASIC17.49■□□□□ 0.39
NKX2-2O95096 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-2O95096 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-2O95096 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-2O95096 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-2O95096 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
NKX2-2O95096 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms