Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCF11O94913 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCF11O94913 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
PCF11O94913 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
PCF11O94913 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCF11O94913 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCF11O94913 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.6■■■□□ 2.33
PCF11O94913 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC29.6■■■□□ 2.33
PCF11O94913 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC29.6■■■□□ 2.33
PCF11O94913 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC29.59■■■□□ 2.33
PCF11O94913 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC29.59■■■□□ 2.33
PCF11O94913 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC29.59■■■□□ 2.33
PCF11O94913 HLA-F-220ENST00000434407 884 ntBASIC29.59■■■□□ 2.33
PCF11O94913 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.59■■■□□ 2.33
PCF11O94913 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.59■■■□□ 2.33
PCF11O94913 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC29.59■■■□□ 2.33
PCF11O94913 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC29.59■■■□□ 2.33
PCF11O94913 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
PCF11O94913 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PCF11O94913 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
PCF11O94913 AL512353.2-201ENST00000448759 1962 ntBASIC29.58■■■□□ 2.33
PCF11O94913 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
PCF11O94913 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC29.58■■■□□ 2.33
PCF11O94913 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
PCF11O94913 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC29.58■■■□□ 2.33
PCF11O94913 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 IRX1P1-201ENST00000438849 1838 ntBASIC29.58■■■□□ 2.33
PCF11O94913 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCF11O94913 AL158211.5-201ENST00000623583 2518 ntBASIC29.57■■■□□ 2.32
PCF11O94913 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
PCF11O94913 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC29.57■■■□□ 2.32
PCF11O94913 MIR3917-201ENST00000580971 93 ntBASIC29.57■■■□□ 2.32
PCF11O94913 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.57■■■□□ 2.32
PCF11O94913 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC29.57■■■□□ 2.32
PCF11O94913 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
PCF11O94913 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PCF11O94913 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC29.56■■■□□ 2.32
PCF11O94913 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
PCF11O94913 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC29.56■■■□□ 2.32
PCF11O94913 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.56■■■□□ 2.32
PCF11O94913 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.56■■■□□ 2.32
PCF11O94913 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.56■■■□□ 2.32
PCF11O94913 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC29.56■■■□□ 2.32
PCF11O94913 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC29.56■■■□□ 2.32
PCF11O94913 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
PCF11O94913 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.56■■■□□ 2.32
PCF11O94913 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.56■■■□□ 2.32
PCF11O94913 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC29.56■■■□□ 2.32
PCF11O94913 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 AL109659.2-201ENST00000606809 1674 ntBASIC29.56■■■□□ 2.32
PCF11O94913 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC29.56■■■□□ 2.32
PCF11O94913 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC29.56■■■□□ 2.32
PCF11O94913 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCF11O94913 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
PCF11O94913 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
PCF11O94913 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 KRT8P10-201ENST00000450021 1447 ntBASIC29.55■■■□□ 2.32
PCF11O94913 HOXB1-202ENST00000577092 1414 ntBASIC29.55■■■□□ 2.32
PCF11O94913 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.55■■■□□ 2.32
PCF11O94913 AL136038.4-201ENST00000603606 1261 ntBASIC29.55■■■□□ 2.32
PCF11O94913 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCF11O94913 AC008556.1-201ENST00000610908 2040 ntBASIC29.55■■■□□ 2.32
PCF11O94913 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC29.54■■■□□ 2.32
PCF11O94913 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCF11O94913 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCF11O94913 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms