Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC26.24■■□□□ 1.79
BRD4O60885 AC083849.1-201ENST00000615227 514 ntBASIC26.24■■□□□ 1.79
BRD4O60885 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC26.24■■□□□ 1.79
BRD4O60885 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.24■■□□□ 1.79
BRD4O60885 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.24■■□□□ 1.79
BRD4O60885 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRD4O60885 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC26.23■■□□□ 1.79
BRD4O60885 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRD4O60885 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRD4O60885 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
BRD4O60885 LY6E-213ENST00000522528 606 ntTSL 3 BASIC26.23■■□□□ 1.79
BRD4O60885 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC26.23■■□□□ 1.79
BRD4O60885 KRT126P-201ENST00000549467 1181 ntBASIC26.23■■□□□ 1.79
BRD4O60885 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.23■■□□□ 1.79
BRD4O60885 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRD4O60885 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BRD4O60885 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRD4O60885 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 KRT18P48-201ENST00000434763 852 ntBASIC26.22■■□□□ 1.79
BRD4O60885 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.22■■□□□ 1.79
BRD4O60885 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC26.22■■□□□ 1.79
BRD4O60885 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.22■■□□□ 1.79
BRD4O60885 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
BRD4O60885 HYMAI.1-201ENST00000620949 238 ntBASIC26.22■■□□□ 1.79
BRD4O60885 AC104417.2-201ENST00000562989 1793 ntBASIC26.22■■□□□ 1.79
BRD4O60885 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC26.22■■□□□ 1.79
BRD4O60885 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
BRD4O60885 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRD4O60885 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC26.22■■□□□ 1.79
BRD4O60885 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
BRD4O60885 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.21■■□□□ 1.79
BRD4O60885 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC26.21■■□□□ 1.79
BRD4O60885 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.21■■□□□ 1.79
BRD4O60885 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC26.21■■□□□ 1.79
BRD4O60885 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC26.21■■□□□ 1.79
BRD4O60885 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
BRD4O60885 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
BRD4O60885 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC26.21■■□□□ 1.79
BRD4O60885 BX323043.1-201ENST00000641006 1765 ntBASIC26.21■■□□□ 1.79
BRD4O60885 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.21■■□□□ 1.79
BRD4O60885 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.21■■□□□ 1.79
BRD4O60885 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26.2■■□□□ 1.79
BRD4O60885 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.2■■□□□ 1.79
BRD4O60885 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.2■■□□□ 1.79
BRD4O60885 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC26.2■■□□□ 1.79
BRD4O60885 PTK2-216ENST00000519881 863 ntTSL 3 BASIC26.2■■□□□ 1.79
BRD4O60885 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.2■■□□□ 1.79
BRD4O60885 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
BRD4O60885 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC26.2■■□□□ 1.79
BRD4O60885 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC26.2■■□□□ 1.79
BRD4O60885 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
BRD4O60885 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
BRD4O60885 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC26.2■■□□□ 1.78
BRD4O60885 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
BRD4O60885 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC26.2■■□□□ 1.78
BRD4O60885 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
BRD4O60885 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.2■■□□□ 1.78
BRD4O60885 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC26.19■■□□□ 1.78
BRD4O60885 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
BRD4O60885 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC26.19■■□□□ 1.78
BRD4O60885 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.19■■□□□ 1.78
BRD4O60885 PTGES2-AS1-201ENST00000443493 2100 ntBASIC26.19■■□□□ 1.78
BRD4O60885 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 CD81-212ENST00000526072 1172 ntTSL 5 BASIC26.19■■□□□ 1.78
BRD4O60885 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC26.19■■□□□ 1.78
BRD4O60885 AC069148.1-201ENST00000608741 768 ntBASIC26.19■■□□□ 1.78
BRD4O60885 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD4O60885 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
BRD4O60885 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC26.18■■□□□ 1.78
BRD4O60885 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
BRD4O60885 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms