Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 AC096733.2-201ENST00000609937 1394 ntBASIC20.24■□□□□ 0.83
O00370 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.24■□□□□ 0.83
O00370 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.24■□□□□ 0.83
O00370 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.24■□□□□ 0.83
O00370 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
O00370 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.24■□□□□ 0.83
O00370 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.24■□□□□ 0.83
O00370 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.24■□□□□ 0.83
O00370 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 FEM1AP3-201ENST00000403722 1741 ntBASIC20.24■□□□□ 0.83
O00370 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
O00370 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
O00370 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.23■□□□□ 0.83
O00370 FP475955.4-201ENST00000623131 1990 ntBASIC20.23■□□□□ 0.83
O00370 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.23■□□□□ 0.83
O00370 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
O00370 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.23■□□□□ 0.83
O00370 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.23■□□□□ 0.83
O00370 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.23■□□□□ 0.83
O00370 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.23■□□□□ 0.83
O00370 CKBP1-201ENST00000565489 1086 ntBASIC20.23■□□□□ 0.83
O00370 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.23■□□□□ 0.83
O00370 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.23■□□□□ 0.83
O00370 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
O00370 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.23■□□□□ 0.83
O00370 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
O00370 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.23■□□□□ 0.83
O00370 AC079598.2-202ENST00000546624 1451 ntBASIC20.23■□□□□ 0.83
O00370 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
O00370 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
O00370 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.22■□□□□ 0.83
O00370 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.22■□□□□ 0.83
O00370 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.22■□□□□ 0.83
O00370 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
O00370 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
O00370 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
O00370 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.22■□□□□ 0.83
O00370 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.22■□□□□ 0.83
O00370 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.22■□□□□ 0.83
O00370 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
O00370 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
O00370 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.21■□□□□ 0.83
O00370 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.21■□□□□ 0.83
O00370 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.21■□□□□ 0.83
O00370 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
O00370 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
O00370 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
O00370 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
O00370 UNC93B2-201ENST00000285383 730 ntBASIC20.21■□□□□ 0.83
O00370 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 AC097488.1-201ENST00000507834 756 ntBASIC20.21■□□□□ 0.83
O00370 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.21■□□□□ 0.83
O00370 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
O00370 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
O00370 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.21■□□□□ 0.83
O00370 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
O00370 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
O00370 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.2■□□□□ 0.82
O00370 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.2■□□□□ 0.82
O00370 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
O00370 LETM1P2-201ENST00000597330 2178 ntBASIC20.2■□□□□ 0.82
O00370 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.2■□□□□ 0.82
O00370 SLC25A1P4-201ENST00000567977 778 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms