Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MIR5004-201ENST00000579078 107 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AP001485.1-201ENST00000604799 199 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC104465.1-201ENST00000611365 139 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC022336.2-201ENST00000568966 2538 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 BX322639.1-202ENST00000423987 2213 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 MIR544A-201ENST00000384855 91 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP104-201ENST00000410989 118 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 RN7SKP53-201ENST00000411337 315 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 AL451074.5-201ENST00000415894 435 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 LARP7P3-201ENST00000579888 337 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 AC004825.2-201ENST00000616634 455 ntBASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.44□□□□□ -1.7
RTCBQ9Y3I0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 Z83843.1-201ENST00000604070 3685 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.8-201ENST00000362353 102 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 RNU6-1081P-201ENST00000384537 107 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 RN7SKP61-201ENST00000410642 295 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 Z75741.1-201ENST00000446793 314 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 UQCRBP2-201ENST00000447827 297 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 HMGB3P8-201ENST00000449709 577 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 RNY3P16-201ENST00000516338 101 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 AP005660.1-201ENST00000522972 293 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 AL162274.2-201ENST00000614406 332 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 AC007656.2-201ENST00000624902 4547 ntBASIC4.43□□□□□ -1.7
RTCBQ9Y3I0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 RNU6-884P-201ENST00000363889 107 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.308-201ENST00000365043 101 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 RPL23AP3-201ENST00000453844 468 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 FCF1P8-201ENST00000510322 597 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 RNU6-579P-201ENST00000516879 102 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 MIR4276-201ENST00000584832 70 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AL451007.1-201ENST00000595491 289 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 AC010733.2-201ENST00000589496 5702 ntBASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTCBQ9Y3I0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC058791.1-201ENST00000608412 3198 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 RNU6-81P-201ENST00000365608 104 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 MIR3074-201ENST00000384885 81 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 MIR888-201ENST00000401186 77 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 FTH1P15-201ENST00000406984 280 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.597-201ENST00000410463 100 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP306-201ENST00000411087 107 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 COTL1P1-201ENST00000422309 375 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC078809.1-201ENST00000427601 140 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 RPL27AP5-201ENST00000469428 449 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC078918.1-201ENST00000498515 228 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 RN7SKP209-201ENST00000516888 304 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP54-201ENST00000516951 92 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC022441.3-201ENST00000605737 136 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC005828.6-201ENST00000606610 232 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC006386.2-201ENST00000624491 75 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AC012005.1-201ENST00000624575 75 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 AL109809.4-201ENST00000603520 2185 ntBASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RTCBQ9Y3I0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms