Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
FOXA2Q9Y261 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 MIRLET7G-201ENST00000362280 84 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 MIR208B-201ENST00000401172 77 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AL590002.1-201ENST00000406554 418 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 EIF1AXP1-201ENST00000419267 435 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 MTND3P9-201ENST00000429526 346 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC114801.2-201ENST00000503825 781 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC005741.1-201ENST00000511094 432 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC025465.4-201ENST00000513422 638 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC021269.2-201ENST00000532318 330 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC078814.3-201ENST00000553036 491 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AL157687.1-201ENST00000554853 619 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 RNU6-89P-201ENST00000606519 100 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC092954.2-201ENST00000609103 430 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 PCGEM1.1-201ENST00000613431 131 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC015540.1-201ENST00000615828 501 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 SNORA43.4-201ENST00000629559 138 ntBASIC1.89□□□□□ -2.11
FOXA2Q9Y261 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
FOXA2Q9Y261 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 RNU6-1317P-201ENST00000364582 104 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 Y_RNA.500-201ENST00000384466 111 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 RNU6-160P-201ENST00000384591 107 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 SNORA80E-201ENST00000384744 137 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 MTND2P29-201ENST00000438595 412 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 MTCO2P7-201ENST00000446518 666 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 UBE2DNL-203ENST00000474922 222 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC083904.1-201ENST00000487828 231 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 RN7SL636P-201ENST00000497504 294 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC026436.1-201ENST00000510537 270 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 RNU6-1332P-201ENST00000516666 104 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 EIF4A1P12-201ENST00000551910 141 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC010525.2-201ENST00000590920 195 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC103810.6-201ENST00000606708 136 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AL136221.1-201ENST00000621449 509 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 FER-210ENST00000628534 558 ntTSL 5 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AL450472.1-202ENST00000637286 180 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
FOXA2Q9Y261 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FOXA2Q9Y261 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNU6-23P-201ENST00000363283 107 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNU6-438P-201ENST00000365561 103 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNU6-933P-201ENST00000384424 107 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 MIR676-201ENST00000390702 67 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNU4-26P-201ENST00000410270 107 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC012306.1-201ENST00000423267 114 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 UBE2V1P4-201ENST00000425374 344 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 HMGN2P18-201ENST00000450680 270 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AMD1P1-201ENST00000457220 922 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC021146.2-201ENST00000504736 556 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 RNU5F-4P-201ENST00000516581 114 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 PRELID2P1-201ENST00000552837 301 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 SCOCP1-201ENST00000554676 349 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC090517.1-201ENST00000569307 266 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 SNORD53-201ENST00000579969 78 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC012557.2-201ENST00000605919 418 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC121333.1-201ENST00000567488 2709 ntBASIC1.87□□□□□ -2.11
FOXA2Q9Y261 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXA2Q9Y261 AC245060.5-201ENST00000610778 3293 ntBASIC1.86□□□□□ -2.11
FOXA2Q9Y261 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
FOXA2Q9Y261 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms