Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.15□□□□□ -1.58
PDZRN3Q9UPQ7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.15□□□□□ -1.58
PDZRN3Q9UPQ7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.15□□□□□ -1.58
PDZRN3Q9UPQ7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNU5A-1-201ENST00000362698 116 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-1228P-201ENST00000391014 107 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNA5SP239-201ENST00000410218 129 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 HSPE1P12-201ENST00000412576 301 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC009963.1-201ENST00000417265 157 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC138623.1-201ENST00000418060 216 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-625P-201ENST00000459412 107 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC026726.1-201ENST00000512859 601 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 RNA5SP471-201ENST00000516971 106 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC026403.1-201ENST00000518938 295 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC018448.1-201ENST00000552843 316 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AL161756.2-201ENST00000604597 246 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 AC025166.1-201ENST00000612411 163 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 SAGE4P-201ENST00000442271 3381 ntBASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDZRN3Q9UPQ7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 SNORA73.2-201ENST00000364946 201 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-1336P-201ENST00000383886 109 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 SNORA9-201ENST00000384215 133 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 MIR10A-201ENST00000385043 110 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 MIR483-201ENST00000385070 76 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 MIR526A2-201ENST00000390198 65 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AL451050.1-201ENST00000450126 415 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AC146507.2-201ENST00000460608 476 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-143P-201ENST00000516942 93 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AC006199.1-201ENST00000548728 219 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 AC010329.5-201ENST00000623497 2174 ntBASIC5.14□□□□□ -1.59
PDZRN3Q9UPQ7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 RNA5SP124-201ENST00000362739 110 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 Y_RNA.85-201ENST00000363014 111 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 AL355497.1-201ENST00000406262 551 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 MIR1302-5-201ENST00000408164 150 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 RNU4-43P-201ENST00000410628 137 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 RPL31P2-201ENST00000413849 377 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 AC006011.1-201ENST00000442758 349 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 AC006445.2-201ENST00000510061 472 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 RNU7-143P-201ENST00000516781 65 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 AC007179.3-201ENST00000604976 235 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 MTND5P18-201ENST00000445624 1801 ntBASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDZRN3Q9UPQ7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-647P-201ENST00000364243 107 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 Y_RNA.229-201ENST00000364347 113 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 Y_RNA.287-201ENST00000364853 94 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 RNY3P5-201ENST00000384127 102 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 SNORA29-201ENST00000384183 140 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AC093578.1-201ENST00000415219 368 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AC091390.3-201ENST00000426478 338 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AC008065.1-201ENST00000428525 348 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AL627311.1-201ENST00000431514 115 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 HMGB3P8-201ENST00000449709 577 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-436P-201ENST00000516171 114 ntBASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PDZRN3Q9UPQ7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-339P-201ENST00000384310 107 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 Y_RNA.544-201ENST00000384650 113 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 MIR124-3-201ENST00000384866 87 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 RN7SKP156-201ENST00000410308 342 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-927P-201ENST00000516199 100 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 RNU6-840P-201ENST00000517275 65 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms