Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTI1BQ9UEU0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTI1BQ9UEU0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RNU6-727P-201ENST00000363592 107 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 Y_RNA.286-201ENST00000364813 102 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RNU6-1175P-201ENST00000365200 107 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 SNORA18.2-201ENST00000383865 132 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RNU1-13P-201ENST00000384499 162 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 MIR29B2-201ENST00000385055 81 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 MIR2116-201ENST00000517221 80 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 AC008739.2-201ENST00000597006 317 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1BQ9UEU0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RNU6-1026P-201ENST00000384465 108 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 SNORA53-201ENST00000391141 249 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AC004866.1-201ENST00000411748 78 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 ELOCP21-201ENST00000412558 336 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RAB28P5-201ENST00000427490 651 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AC004386.2-201ENST00000441858 148 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 TRBV12-2-201ENST00000489763 344 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 SERF1AP1-201ENST00000514575 187 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RNU6-344P-201ENST00000516635 111 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RNA5SP196-201ENST00000625967 102 ntBASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1BQ9UEU0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 SNORD27-201ENST00000363981 72 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 MICF-203ENST00000432679 129 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC009237.7-201ENST00000447357 229 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 SEM1P1-201ENST00000506694 209 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 SCARNA24.2-201ENST00000516968 130 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 HSPE1P18-201ENST00000517602 280 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 MIR5006-201ENST00000583027 110 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC010900.2-201ENST00000604508 210 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 SNORD11B-201ENST00000607707 90 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AL021368.2-201ENST00000606125 5352 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 AC103988.1-201ENST00000566382 2177 ntBASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1BQ9UEU0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 Y_RNA.515-201ENST00000384535 112 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 SNORA12-201ENST00000391162 147 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AL033519.2-201ENST00000403958 392 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AL603910.2-201ENST00000407268 136 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 ARF4P2-201ENST00000430209 526 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 RPS29P12-201ENST00000460178 152 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AL049830.2-201ENST00000480072 201 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 RN7SKP21-201ENST00000516503 220 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 RNU6-111P-201ENST00000517179 105 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 AL137849.1-201ENST00000604767 169 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms