Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC018889.1-201ENST00000605372 397 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 RNU6-85P-201ENST00000605989 107 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AP001330.5-201ENST00000607176 411 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AC004908.3-201ENST00000610248 625 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AC063943.3-201ENST00000615562 356 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AL132822.1-201ENST00000617063 513 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AL353997.5-201ENST00000618886 171 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AC139792.3-201ENST00000623525 224 ntBASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CLCF1Q9UBD9 AP000560.1-201ENST00000624150 1937 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 RNU6-1322P-201ENST00000364309 107 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 RNU6-827P-201ENST00000365553 106 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 RNU6-259P-201ENST00000383999 107 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 RNU6-43P-201ENST00000384302 107 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 Y_RNA.481-201ENST00000384373 102 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 SNORD37.1-201ENST00000390968 65 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 Z83846.1-201ENST00000446798 265 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MTND1P29-201ENST00000448112 647 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 SNRPGP7-201ENST00000469016 106 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 RNU2-44P-201ENST00000516795 194 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC090115.3-201ENST00000553218 849 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC103996.1-201ENST00000555468 102 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MIR3683-201ENST00000580847 82 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MIR4424-201ENST00000585257 86 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 HULC.1-201ENST00000612720 240 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 DUXAP9-208ENST00000622815 614 ntBASIC1.6□□□□□ -2.15
CLCF1Q9UBD9 MTND5P26-201ENST00000426018 1752 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-82P-201ENST00000363970 107 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 SNORA16.1-201ENST00000364597 132 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-142P-201ENST00000384019 107 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 MIR518A2-201ENST00000384966 87 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 MIR29C-201ENST00000385231 88 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-1106P-201ENST00000390845 107 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNA5SP219-201ENST00000390940 113 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC078809.1-201ENST00000427601 140 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC010975.2-201ENST00000427781 588 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC244670.1-201ENST00000436879 112 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AL121601.2-201ENST00000438019 707 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 MTND2P22-201ENST00000444325 1033 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 PRELID3BP1-201ENST00000457142 540 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-261P-201ENST00000459506 102 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-991P-201ENST00000516168 107 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-965P-201ENST00000516721 96 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC104383.1-201ENST00000530297 370 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AL034555.1-201ENST00000604816 211 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AC104073.3-201ENST00000610942 955 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 Z99129.1-201ENST00000612510 255 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AL158209.2-201ENST00000619266 216 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 SNORD98-201ENST00000636377 67 ntBASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.59□□□□□ -2.15
CLCF1Q9UBD9 RNU1-17P-201ENST00000363022 152 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AL627390.1-201ENST00000396055 340 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 RNU2-66P-201ENST00000410650 161 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 SRIP3-201ENST00000413200 219 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AL358453.1-201ENST00000422522 250 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 SNAP23P1-201ENST00000433229 246 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 DNAJC19P4-201ENST00000440115 345 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 RNU7-138P-201ENST00000459479 64 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 SRRM1P2-201ENST00000464531 1192 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 MTCO3P38-201ENST00000468910 766 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AC083798.1-201ENST00000472671 131 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 CCDC34P1-201ENST00000507441 517 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 PTP4A1P4-201ENST00000512479 322 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 HSPE1P4-201ENST00000550617 308 ntBASIC1.58□□□□□ -2.16
CLCF1Q9UBD9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms