Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF38Q9H0F5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU6-1020P-201ENST00000363684 107 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU1-33P-201ENST00000364249 162 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 Z98749.2-208ENST00000381646 500 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 SNORD63-201ENST00000384262 68 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU6-21P-201ENST00000384710 107 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 MIR153-2-201ENST00000385225 87 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 HMGN2P8-201ENST00000391458 268 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RN7SKP51-201ENST00000410781 304 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 MTATP6P29-201ENST00000415057 132 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AL714022.1-201ENST00000439897 151 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RPL21P10-201ENST00000463521 490 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU2-31P-201ENST00000516954 155 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RNU6-1212P-201ENST00000517023 104 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 MIR5695-201ENST00000579717 85 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 KLKP1-201ENST00000595979 403 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC037487.3-201ENST00000606668 112 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 SNORD113-5-201ENST00000607261 78 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 RMST_6.1-201ENST00000611980 203 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC021753.1-201ENST00000635724 168 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
RNF38Q9H0F5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF38Q9H0F5 AC010680.1-201ENST00000590024 3590 ntBASIC3.65□□□□□ -1.82
RNF38Q9H0F5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF38Q9H0F5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.65□□□□□ -1.82
RNF38Q9H0F5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.292-201ENST00000364904 97 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 RNU1-140P-201ENST00000365040 165 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 SNORA9-201ENST00000384215 133 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.504-201ENST00000384481 104 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 RNU6-541P-201ENST00000384709 110 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 MIR487A-201ENST00000385009 80 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC243964.1-201ENST00000441814 261 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC109925.1-201ENST00000478069 331 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 RNU6-1114P-201ENST00000516022 107 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.679-201ENST00000516416 91 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AP004607.1-201ENST00000524456 203 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 LINC00933-203ENST00000559812 219 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 UBL5P4-201ENST00000562584 236 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 HMGN2P15-201ENST00000585707 270 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AL162424.1-201ENST00000602325 221 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 Z83818.1-201ENST00000603584 150 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 AC132825.6-201ENST00000638861 357 ntBASIC3.65□□□□□ -1.83
RNF38Q9H0F5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF38Q9H0F5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 SNORA25.1-201ENST00000362326 128 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RNY4P28-201ENST00000365281 93 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.569-201ENST00000384749 103 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 U3.39-201ENST00000408569 239 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.590-201ENST00000410140 107 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AC005300.1-201ENST00000428401 373 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RNU7-23P-201ENST00000459465 62 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RN7SKP83-201ENST00000516512 178 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AL078605.1-201ENST00000603529 500 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 AC005296.1-201ENST00000616145 209 ntBASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF38Q9H0F5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 SNORD115-32-201ENST00000364079 82 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 SNORA14A-201ENST00000364773 135 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 RNA5SP240-201ENST00000365355 128 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 RNU6-326P-201ENST00000365480 107 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.418-201ENST00000384029 102 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms