Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 RNU6-428P-201ENST00000362942 107 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 RNU6-996P-201ENST00000365438 107 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 DEFB108C-201ENST00000400154 252 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 MIR934-201ENST00000401241 83 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 RN7SKP32-201ENST00000410167 303 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 RNA5SP201-201ENST00000410316 124 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AC123900.1-201ENST00000420390 96 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 NCOR1P3-201ENST00000420479 303 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AL121890.1-201ENST00000435457 205 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 MTCO3P38-201ENST00000468910 766 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 MTATP6P3-201ENST00000581686 676 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AC010900.2-201ENST00000604508 210 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AP001836.1-201ENST00000604675 523 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 AC064807.4-201ENST00000607201 407 ntBASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHMP4AQ9BY43 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 SNORA64-201ENST00000384674 134 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 MIR597-201ENST00000384968 97 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 VN1R36P-201ENST00000414936 291 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 EIF1AXP1-201ENST00000419267 435 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 snoU13.15-201ENST00000459407 104 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 YWHAEP4-201ENST00000505390 198 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 SNORD60.2-201ENST00000516883 86 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AP003034.1-201ENST00000534621 422 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 AC009509.4-201ENST00000619202 509 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 LINC02555-201ENST00000563933 1951 ntBASIC2.68□□□□□ -1.98
CHMP4AQ9BY43 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 RNU6-661P-201ENST00000362409 107 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 SNORD114-1-201ENST00000362705 72 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 RNU6-82P-201ENST00000363970 107 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 RNU6-827P-201ENST00000365553 106 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 Y_RNA.381-201ENST00000365666 102 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 MTCYBP8-201ENST00000422855 651 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 MTCO2P18-201ENST00000457151 658 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 SNRPGP7-201ENST00000469016 106 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 HMGB3P17-201ENST00000504195 649 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 AC104073.3-201ENST00000610942 955 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 AC005520.5-201ENST00000613926 164 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 uc_338.34-201ENST00000617467 174 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 AC098657.3-201ENST00000620434 263 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 AL160394.1-201ENST00000624765 724 ntBASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.67□□□□□ -1.98
CHMP4AQ9BY43 RNA5SP493-201ENST00000364115 91 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 RNU6-438P-201ENST00000365561 103 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AC019129.1-201ENST00000403786 261 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 RNU4-26P-201ENST00000410270 107 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 HMGN2P18-201ENST00000450680 270 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 TPT1P7-201ENST00000458300 517 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AL163973.1-201ENST00000484753 577 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AC008628.2-201ENST00000502605 298 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AC114801.2-201ENST00000503825 781 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 EIF4A1P12-201ENST00000551910 141 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 MTND1P15-201ENST00000579262 949 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AP005136.1-201ENST00000579765 429 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 AL391646.1-201ENST00000603860 190 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 ZNF720P1-201ENST00000562403 1939 ntBASIC2.66□□□□□ -1.98
CHMP4AQ9BY43 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.65□□□□□ -1.98
CHMP4AQ9BY43 Y_RNA.1-201ENST00000352915 104 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 RNA5SP37-201ENST00000365420 130 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 MIR30A-201ENST00000385092 71 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 RNU2-40P-201ENST00000410833 196 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 MTCO3P41-201ENST00000414801 328 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 MTND2P22-201ENST00000444325 1033 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 RNU7-180P-201ENST00000459240 63 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 AC012507.3-201ENST00000603556 477 ntBASIC2.65□□□□□ -1.99
CHMP4AQ9BY43 RNU6-1042P-201ENST00000384204 107 ntBASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 RNU6-1119P-201ENST00000384349 108 ntBASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 Y_RNA.582-201ENST00000391023 95 ntBASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.64□□□□□ -1.99
CHMP4AQ9BY43 RNA5SP182-201ENST00000516064 82 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms