Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 CYCSP48-201ENST00000417124 323 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 MTATP6P21-201ENST00000440681 189 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 SRIP1-201ENST00000489235 288 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 RNU7-116P-201ENST00000516940 62 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 EIF4A1P12-201ENST00000551910 141 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 SNORD115-40-201ENST00000606510 82 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 MALAT1.1-201ENST00000618249 95 ntBASIC4.85□□□□□ -1.63
LRCH3Q96II8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.85□□□□□ -1.63
LRCH3Q96II8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRCH3Q96II8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRCH3Q96II8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRCH3Q96II8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRCH3Q96II8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LRCH3Q96II8 SNORD114-7-201ENST00000362520 77 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 MIR624-201ENST00000385217 97 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 RNA5SP136-201ENST00000410906 107 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 RPL36AP10-201ENST00000421785 322 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 AL591419.1-201ENST00000427423 339 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 IFNWP4-201ENST00000453148 294 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 IFITM8P-201ENST00000522529 394 ntBASIC4.84□□□□□ -1.63
LRCH3Q96II8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.84□□□□□ -1.63
LRCH3Q96II8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.84□□□□□ -1.63
LRCH3Q96II8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.84□□□□□ -1.63
LRCH3Q96II8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LRCH3Q96II8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRCH3Q96II8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRCH3Q96II8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRCH3Q96II8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRCH3Q96II8 ZNF720P1-201ENST00000562403 1939 ntBASIC4.84□□□□□ -1.64
LRCH3Q96II8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 RNU6-600P-201ENST00000362524 99 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RNY1P10-201ENST00000363268 113 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RNU6-1124P-201ENST00000384169 107 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RNU6-1197P-201ENST00000391183 107 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 MIR873-201ENST00000401120 77 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RNA5SP127-201ENST00000411051 133 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 AC002075.2-201ENST00000425207 252 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 MTATP8P2-201ENST00000435212 202 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 AF228730.3-201ENST00000436691 102 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RPL23AP62-201ENST00000463396 453 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 AC078817.1-201ENST00000492623 435 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 ACA59.2-201ENST00000517061 156 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.83□□□□□ -1.64
LRCH3Q96II8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRCH3Q96II8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRCH3Q96II8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRCH3Q96II8 AL672167.1-203ENST00000641299 2975 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRCH3Q96II8 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RPL23AP52-201ENST00000439311 478 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 HMGN2P10-201ENST00000448085 265 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNA5SP103-201ENST00000459503 118 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNA5SP395-201ENST00000516567 118 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNU6-1282P-201ENST00000516735 96 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNU2-44P-201ENST00000516795 194 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNU6-158P-201ENST00000517104 100 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNU6-365P-201ENST00000517113 106 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 MIR5195-201ENST00000583555 115 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.82□□□□□ -1.64
LRCH3Q96II8 SNRPGP15-201ENST00000600149 222 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 AC005972.2-201ENST00000604690 348 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RNA5SP108-201ENST00000605921 117 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 AC093732.2-201ENST00000607950 274 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRCH3Q96II8 uc_338.13-201ENST00000618243 179 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 AL139811.1-201ENST00000424779 2299 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRCH3Q96II8 AL589743.1-201ENST00000551932 2712 ntBASIC4.82□□□□□ -1.64
LRCH3Q96II8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRCH3Q96II8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.82□□□□□ -1.64
LRCH3Q96II8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRCH3Q96II8 AC104260.2-201ENST00000623551 3497 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms