Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 Y_RNA.138-201ENST00000363462 102 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 Y_RNA.414-201ENST00000384011 101 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RNU1-148P-201ENST00000384472 162 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFT1Q96AA3 AL355497.1-201ENST00000406262 551 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RNU2-52P-201ENST00000410680 190 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 POLHP1-201ENST00000411806 470 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 ARL5AP1-201ENST00000418991 388 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFT1Q96AA3 IPO7P1-201ENST00000442031 636 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RNU7-138P-201ENST00000459479 64 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RPL30P12-201ENST00000474666 353 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC068781.1-201ENST00000488231 618 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 Y_RNA.654-201ENST00000497848 106 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 Y_RNA.701-201ENST00000516812 110 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 RN7SKP256-201ENST00000517201 314 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 AP005597.4-201ENST00000526762 229 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AC092747.3-201ENST00000603769 301 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AL359757.2-201ENST00000624309 274 ntBASIC2.17□□□□□ -2.06
RFT1Q96AA3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RFT1Q96AA3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RFT1Q96AA3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFT1Q96AA3 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 RNU6-859P-201ENST00000362728 107 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 SNORA3A-201ENST00000364113 130 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC009161.1-201ENST00000417306 376 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 ARL5AP4-201ENST00000430731 512 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC025750.2-201ENST00000442609 450 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC124916.1-201ENST00000444020 547 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 SNORD109B-201ENST00000458961 67 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 SNORD109A-201ENST00000459128 67 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 RPL30P1-201ENST00000488676 339 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 CKS1BP2-201ENST00000497342 240 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 MIR3672-201ENST00000584290 82 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 BNIP3P22-201ENST00000593399 556 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC009314.1-201ENST00000603871 304 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 RNU6-85P-201ENST00000605989 107 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 AC093913.1-201ENST00000614178 329 ntBASIC2.16□□□□□ -2.06
RFT1Q96AA3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RFT1Q96AA3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
RFT1Q96AA3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RFT1Q96AA3 AC121333.1-201ENST00000567488 2709 ntBASIC2.15□□□□□ -2.06
RFT1Q96AA3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
RFT1Q96AA3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-254P-201ENST00000363377 107 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 SNORA70.4-201ENST00000365509 134 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 SNORD116-29-201ENST00000384516 83 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 MIR544A-201ENST00000384855 91 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 MIR491-201ENST00000384877 84 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 MIR9-1-201ENST00000385198 89 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-510P-201ENST00000391239 108 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AL360182.1-201ENST00000397433 468 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AL591034.2-201ENST00000402839 359 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 MIR548F5-201ENST00000408421 86 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-293P-201ENST00000411259 106 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 AF228730.4-201ENST00000421457 183 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 SNAP23P1-201ENST00000433229 246 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 TRBVA-201ENST00000498804 316 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC096725.1-201ENST00000514266 313 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-1069P-201ENST00000516612 133 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 RNU6-586P-201ENST00000517265 104 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC115990.1-201ENST00000526957 301 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 AC074050.1-201ENST00000563247 211 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 MTND4LP32-201ENST00000636111 270 ntBASIC2.15□□□□□ -2.07
RFT1Q96AA3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RFT1Q96AA3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms