Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 TBCAP1-201ENST00000436520 327 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 RNU7-120P-201ENST00000459334 63 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.683-201ENST00000516508 93 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 AC105137.2-201ENST00000569073 466 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 Z83818.1-201ENST00000603584 150 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 MIR6868-201ENST00000611215 58 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 SNORD98-201ENST00000636377 67 ntBASIC3.33□□□□□ -1.88
DTX3Q8N9I9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
DTX3Q8N9I9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
DTX3Q8N9I9 MIR410-201ENST00000362222 80 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.179-201ENST00000363844 90 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.292-201ENST00000364904 97 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 SNORA72.2-201ENST00000365028 127 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 RNU6-378P-201ENST00000384324 107 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 RNU6-19P-201ENST00000384718 107 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 SNORA46.1-201ENST00000391069 153 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 PCNPP3-201ENST00000393579 471 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 UQCRBP2-201ENST00000447827 297 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 RPL23AP3-201ENST00000453844 468 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 COX6CP14-201ENST00000469580 174 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 AC091959.1-201ENST00000495857 238 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.32□□□□□ -1.88
DTX3Q8N9I9 AC107393.1-201ENST00000512403 346 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 SNORD116-28-201ENST00000516123 91 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 CYCSP23-201ENST00000519781 313 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.32□□□□□ -1.88
DTX3Q8N9I9 MIR3136-201ENST00000583498 78 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 KLKP1-201ENST00000595979 403 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 MIR7151-201ENST00000617477 60 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 MTND5P35-201ENST00000557537 1720 ntBASIC3.32□□□□□ -1.88
DTX3Q8N9I9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DTX3Q8N9I9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNU6-545P-201ENST00000362681 104 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.122-201ENST00000363331 96 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNY4P28-201ENST00000365281 93 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.418-201ENST00000384029 102 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNU1-13P-201ENST00000384499 162 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNA5SP317-201ENST00000410176 116 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNA5SP311-201ENST00000411290 116 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC023141.4-201ENST00000412031 328 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 MRPS10P1-201ENST00000448483 130 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC007395.1-201ENST00000451333 677 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNU6-625P-201ENST00000459412 107 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RPL7P49-201ENST00000471402 708 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNA5SP315-201ENST00000516340 116 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 SNORD19.2-201ENST00000516978 73 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNA5SP312-201ENST00000517068 116 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AP000867.2-201ENST00000532468 320 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 CYP4A27P-201ENST00000567218 190 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC091167.4-201ENST00000605079 184 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
DTX3Q8N9I9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
DTX3Q8N9I9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNU6-793P-201ENST00000384233 104 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 Y_RNA.464-201ENST00000384282 110 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 MIR549A-201ENST00000385268 96 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 MIR208B-201ENST00000401172 77 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AL133475.1-201ENST00000404414 305 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 RNU6-651P-201ENST00000411040 105 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 AL356095.1-201ENST00000417217 199 ntBASIC3.3□□□□□ -1.88
DTX3Q8N9I9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.3□□□□□ -1.88
DTX3Q8N9I9 MTCO1P5-201ENST00000433573 344 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms